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. 2018 Aug 20;8:12440. doi: 10.1038/s41598-018-30988-4

Table 2.

Prior distributions and hyperparameters in our statewide Bayesian state-space model using age-at-harvest data, split into recruitment and survival parameters.

Recruitment Parameters
Variable Parameter Mean Distribution
LS-a Litter Size 2.5-year-olds 2.00 Gamma (20,10)
LS-b Litter Size 3.5-year-olds 2.00 Gamma (20,10)
LS-c Litter Size 4.5-year-olds 2.00 Gamma (20,10)
LS-d Litter Size 5.5+ year-olds 2.74 Gamma (16.4,6)
PR-a Pregnancy Rate 2.5-year-olds 0.003 Beta (2.61,1000)
PR-b Pregnancy Rate 3.5-year-olds 0.25 Beta (34,100)
PR-c Pregnancy Rate 4.5-year-olds 0.53 Beta (54,48)
PR-d Pregnancy Rate 5.5+ year-olds 0.48 Beta (47,50)
SP Sex Proportion (female) 0.46 Beta (426, 500)
Survival Parameters
Variable Parameter Mean Long-Term Precision Annual Precision
HSm Male Harvest Survival 0.77 3 Gamma (20,0.5)
HSf Female Harvest Survival 0.85 3 Gamma (20,0.5)
NS Non-harvest Survival 0.95 4 Gamma (20,0.5)
CubSa Cub Survival years 0.0–0.5 0.84 4 n/a
CubSb Cub Survival years 0.5–1.5 0.71 4 n/a
Rep Recovery Rate 0.98 2 n/a

We include the variable, parameter description (for gamma distributions these are the shape and rate), mean and distribution used. For survival prior distributions the means are given at the real parameter scale and long-term and annuals precisions (1/variance) are at the link scale (loglog).