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. 2018 Aug 14;9:312. doi: 10.3389/fgene.2018.00312

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Copyright © 2018 Cairns, Jokela, Hultman, Tamminen, Virta and Hiltunen.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Genomic features of model community strains. E. coli K-12, HAMBI 216, HAMBI 1923 and HAMBI 2659 are closed genomes composed of a single chromosome. Other genomes are composed of blocks of adjacent contigs whose order may not reflect genomic position. Contigs are ordered by size for genomes assembled in this study and by order of appearance in assembly file for genomes obtained from databases. Predicted features are depicted by colored blocks along the genome. These include plasmid-derived sequences, genomic islands, prophages, integrons, insertion sequences, antibiotic resistance genes, virulence factors, and CRISPR loci.