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. Author manuscript; available in PMC: 2018 Aug 22.
Published in final edited form as: Nature. 2017 Nov 22;551(7681):E6–E9. doi: 10.1038/nature24634

Extended Data Table 1.

Analysis of post-treatment simulated samples based on sequences obtained before treatment by Novitsky et al.14.

Participant Code14
Number of replicates out of 100 that pass test(s) (p < 0.05) B H OU
Test 1: Divergence Forward evolution 10 0 36
Reverse evolution 4 30 0
Test 2: Evolutionary rate Forward evolution 24 0 41
Reverse evolution 2 29 0
Test 3: Root-to-tip regression Forward evolution 20 9 92
Reverse evolution 56 45 1
Passes at least one test; not contradicted by other tests Forward evolution 22 9 92
Reverse evolution 42 46 1
Passes all three tests Forward evolution 4 0 27
Reverse evolution 1 27 0