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. 2018 Aug 21;8:12527. doi: 10.1038/s41598-018-30667-4

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© The Author(s) 2018

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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(I) Total number of haplotype blocks (HBs), number of HBs introgressed from exotic parents, and number of functional exotic-specific HBs (associated with traits investigated in the study: diseases, heat, drought etc.) on each chromosome for the 984 pre-breeding lines (PBLs). (II) Average grain yield (Kg/ha) and frequency (%) of PBLs for each haplotype, AT, AG, and GG of HB1.28 grown under irrigation [A] or drought stress [B] at Ciudad Obregon, Mexico and Karnal, India, respectively. Y-axis = grain yield, X-axis = haplotype classes. (III) Average grain yield (Kg/ha) and frequency (%) of PBLs with each haplotype, GT, GC and AC of HB18.1 grown under heat stress at Ciudad Obregon, Mexico [A], and drought [B], and irrigated [C] conditions at Karnal, India. Y-axis = grain yield; X-axis = haplotype classes. (IV) Mean yellow rust disease severity and frequency (%) of PBLs with haplotypes CC, GC and GG of HB5.23. The PBLs were evaluated in Ludhiana, India during 2015 [A] and 2016 [B]. Y-axis = disease severity (%), X-axis = haplotype classes. (II–IV) are for evaluation of a sub-set of 134 of the 984 PBLs.