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. 2018 Aug 21;2018:bay076. doi: 10.1093/database/bay076

Table 5.

F1-scores of the 5-fold cross validation with options to annotate or not biomedical entities and the three tokenization options

Tokenization options
Fold Annotation Tokens MWE Both
1 Yes 0.6078 0.6097 0.6088
2 Yes 0.7493 0.7550 0.7399
3 Yes 0.8023 0.7883 0.8067
4 Yes 0.7834 0.7846 0.7581
5 Yes 0.6974 0.7019 0.7018
Average 0.7280 0.7279 0.7231
1 No 0.6257 0.6171 0.6178
2 No 0.7557 0.7516 0.7555
3 No 0.7988 0.7903 0.8012
4 No 0.7904 0.7682 0.7578
5 No 0.7145 0.7136 0.7037
Average 0.7370 0.7282 0.7272