Table 1.
Donor | Age (y) |
Sex | GNE Mutations * |
Muscle Biopsied † |
No. Cells in Biopsy ‡ |
Avg cell length § |
SNA Area/Cav-3 Area ‖ (per avg cell length) ¶ |
SNA/CAV-3 Total Intensity ‖ (per avg cell length) ¶ |
---|---|---|---|---|---|---|---|---|
Control Group: | ||||||||
C1 | 27 | Male | Normal | biceps branchii (L) | 5,338 | 23.26 | 4,988,767 (214,505) | 2,141,539,604 (92,080,962) |
C2 | 42 | Female | Normal | biceps branchii (L) | 6,146 | 18.44 | 4,585,638 (248,657) | 1,298,005,973 (70,384,594) |
C3 | 32 | Female | Normal | biceps branchii (L) | 3,137 | 16.80 | 2,791,129 (166,133) | 882,982,901 (52,556,721) |
C4 | 31 | Male | Normal | biceps branchii (L) | 13,304 | 17.94 | 10,202,823 (568,718) | 3,138,608,250 (174,949,970) |
| ||||||||
Average: | 6,981 | 19.11 | 5,642,089 (299,503) | 1,865,284,182 (97,493,062) | ||||
| ||||||||
GNE Myopathy Group: | ||||||||
GNE-M1 | 27 | Male | p.V603L/ p.V603L | biceps branchii (L) | 1,393 | 11.53 | 816,286 (70,798) | 367,144,808 (31,843,163) |
GNE-M2 | 29 | Male | p.V603L/p.V603L | biceps branchii (L) | 7,332 | 17.46 | 5,328,311 (305,148) | 1,391,871,694 (79,711,274) |
GNE-M3 | 24 | Male | p.V603L/p.A622T | biceps branchii (L) | 3,114 | 16.14 | 1,936,055 (119,976) | 816,679,955 (50,608,913) |
GNE-M4 | 55 | Male | p.D207V/pV603L | triceps branchii (L) | 1,223 | 23.14 | 1,404,210 (60,683) | 540,816,086 (23,371,399) |
GNE-M5 | 40 | Female | p.D207V/p.K458N # | hamstring (R) | 3,318 | 23.81 | 3,831,255 (160,939) | 1,529,534,462 (64,251,094) |
GNE-M6 | 39 | Female | p.D207V/p.V603L | tibialis anterior (R) | 2,600 | 21.06 | 2,279,575 (108,224) | 819,170,403 (38,890,517) |
| ||||||||
Average: | 3,163 | 18.86 | 2,599,282 (137,628) | 910,869,568 (48,112,727) |
Mutation nomenclature according to GNE2 isoform GenBank NP_001121699.
L, left; R, right.
Manually determined, using ImageJ software.
Avg = average. As calculated by Image J software, see text for details.
Area or Intensity of fluorescence (in pixels) determined by Definiens Architect software.
Plotted in Figure 2.
p.K458N is a novelGNE variant (disease causing by MutationTaster, deleterious by SIFT, benign by polyphen, CADD_phred score of 25).