TABLE 1.
Immunogenic epitopes identified by peptide screens of mycobacterial ribosomal proteinsa
| Peptide | Residues | Sequence | P value |
|---|---|---|---|
| Rv0652 (RplL) | |||
| 7 | 93–107 | AKDLVDGAPKPLLEK | 0.0022 |
| 127 | 91–105 | KEAKDLVDSAPKPLL | 0.0001 |
| Rv2904 (RplS) | |||
| 10 | 69–83 | VERTFPVHSPNIDHI | 0.0001 |
| 11 | 15–29 | DIPAFNPGDTINVHV | 0.0290 |
| 12 | 65–79 | YGVGVERTFPVHSPN | 0.0240 |
| 13 | 73–87 | FPVHSPNIDHIEVVT | 0.0002 |
| Rv0707 (RpsC) | |||
| 16 | 210–224 | GKRELAAAAPAGADR | 0.0240 |
| 20 | 206–220 | DIVGGKRELAAAAPA | 0.0167 |
| 32 | 182–196 | IDYGLYEAKTTFGRI | 0.0240 |
| Rv0640 (RpIK) | |||
| 43 | 12–26 | KLQIVAGQANPAPPV | 0.0025 |
| 44 | 67–81 | SFTFTLKTPPAAKLL | 0.0290 |
| 45 | 16–30 | VAGQANPAPPVGPAL | 0.0167 |
| Rv0651 (RpIJ) | |||
| 123 | 146–160 | KAAGLFNAPASQVAR | 0.0001 |
| 124 | 151–165 | FNAPASQVARLAAAL | 0.0001 |
| Rv0683 (RpsG) | |||
| 56 | 16–30 | PVYGSQLVTQLVNKV | 0.0188 |
| Rv0700 (RpsJ) | |||
| 65 | 32–46 | TGASVVGPVPLPTEK | 0.0006 |
| 67 | 28–42 | TVVRTGASVVGPVPL | 0.0401 |
| 172 | 31–45 | RTGASVVGPVPLPTE | 0.0001 |
| Rv0682 (RpsL) | |||
| 102 | 18–32 | KVKTAALKGSPQRRG | 0.0458 |
| 103 | 30–44 | RRGVCTRVYTTTPKK | 0.0240 |
| Rv1630 (RpsA) | |||
| 154 | 431–445 | QMEKFAAAEAEAANA | 0.0001 |
| Rv3458c (RpsD) | |||
| 162 | 1–15 | MARYTGPATRKSRRL | 0.0018 |
Peptides identified in screens for immunogenic epitopes (Fig. 2 and 3) are listed with their locus tag (name), library identification, peptide number, residue location in the intact protein, amino acid sequence, and statistical significance in the screen conducted. Proteins identified as being immunogenic using the approach illustrated in Fig. 1 are highlighted in boldface type.