. 2015 May 18;6(2):94–109. doi: 10.1080/21501203.2015.1043968

Table 2.

Common molecular markers and for representative macrofungi.

Species	Targets	Primer name	Primer sequence	References
Termitomyces sp.	mtSSU-rDNA	ssufw105	TCGCGTTAGCATCGTTACTAGT	Aanen et al. 2002
	mtSSU-rDNA	ssurev475	GCCAGAGACGCGAACGTTAGTCG	Aanen et al. 2002
	EF1a	EF595F	CGTGACTTCATCAAGAACATG	Nobre et al. 2011b
	EF1a	EF1160R	CCGATCTTGTAGACGTCCTG
	RPB2	RPB2-tF	GCG(GA)CGGAAAGACGACATCAG
	RPB2	RPB2-tR	TTGTGATCAGGGAATGGGAT
	RPB2	bRPB2-6F	TGGGGYATGGTNTGYCCYGC	De Fine Licht et al. 2006
	RPB2	bRPB2-7	CCCATRGCYTGYTTMCCCATDGC
	RPB1	RPB1-AF	GARTGYCCDGGDCAYTTYGG
	RPB1	Frpb1-CR	CCNGCDATNTCRTTRTCCATRTA
	EF1α	EF634F*	AGGCTGACTGCGCTATCCTTAT
	EF1α	EF1127R*	GGTTCGATGGCATCGATGGCAT
A. areolatum	nuc-IGS-rDNA	P-1	TTGCAGACGACTTGAATGG	Nielsen et al. 2009
	nuc-IGS-rDNA	5S-2B	CACCGCATCCCGTCTGATCTGCG	Nielsen et al. 2009
	RPB2	bRPB2-6F	TGGGGYATGGTNTGYCCYGC	Bergeron et al. 2011
	RPB2	bRPB2-7.1R	CCCATRGCYTGYTTMCCCATDGC
	TEF1	tef1f	TCMAHGARATYATYAAGGAGAC
	TEF1	tef1rc	DGGGTCGTTYTTSGAGTCA
	LAC-like	laccasef	CACTGGCACGGNTTCTTCCA
	LAC-like	laccaserc	GTGACTATGATACCAGAANGT
	MAP	MIPAro1F*	GTCCTTTCACTCTTCGGTAC	Van Der Nest et al. 2008
	MAP	MIPAro1R*	CAAATAACTGGCGCCATACC
	PAB1	RAB1-470F*	TCTTGGGCTGACTTTTCC
	PAB1	RAB1-1800R*	GGCAGGTAGATCGAGGTTGA
	mat-B	br1-F	TGGCATMTNCARGCNTGGAAYTC
	mat-B	br1-1R	GCGAGNRNCATNAGNCGNAKGTA
Septobasidiaceae fungi	TEF-1	SEF1a1fI	CTYGGIAAGGGITCNTTCAAG	Henk and Vilgalys 2007
Septobasidiaceae fungi	TEF-1	SEF1a1r2	CATICCGGCCTTGATNGTNCC	Henk and Vilgalys 2007
O. sinensis	rDNA	OsT-F*	GTCAAGAAGCAAGCAAAGGAATC	Zhong et al. 2014
	rDNA	OsT-R*	TCAACTGGAGGGTGTGGTGG	Zhong et al. 2014
	MAT1-2-1	Mat1-2F*	TGGAATGCGACTGACTACGA	Zhang et al. 2011**
	MAT1-2-1	Mat1-2R*	CCAGGAGAGCTTGCTTGACT	Zhang et al. 2011**
	MAT1-1-1	MATF2	AAACGCCCTCTCAAYGCNTTYATG	Bushley et al. 2013**
	MAT1-1-1	MATR3	CCACTTGCTTCTGAANGGRTCYTTRTTCCA
	DNA lyase	DNAF3	TTGATGGGATCCGAYCAYTGYCC
	DNA lyase	DNAR2	GTGACCAGGCTGATRCANGGYTC
	MAT1-1-3	M3F1	CAGCAGCCGGTGAAGGTNTWYCAYGA
	MAT1-1-3	M3R1	CTTCGTTGTGTACTTGTANYCNGGRTA
	β-Tubulin	T1	AACATGCGTGAGATTGTAAGT	Quan et al. 2014
	β-Tubulin	T22	TCTGGATGTTGTTGGGAATCC	Quan et al. 2014
	SSU rRNA	NS1	GTAGTCATATGCTTGTCTC	Zhong et al. 2010**
	SSU rRNA	NS4	CTTCCGTCAATTCCTTTAAG	Zhong et al. 2010**
C. militaris	MAT1-1-1	MAT1-F1	CGRGCWAARCGRCCATTKAAYGC	Yokoyama et al. 2006**
	MAT1-1-1	MAT1- R1	TTKCCCATCTCRTCRCGGAYRAARGA
	MAT1- 2-1	MAT2 -F1	GCRTATA TTCT RT ACCGC AG
	MAT1- 2-1	MAT2-R1	CGAGGTT GATAYTGAT AYT G
T. indicum complex	β-Tubulin	Bt2a	GGTAACCAAATCGGTGCTGCTTTC	Wang et al. 2006a
T. indicum complex	β-Tubulin	Bt2b	ACCCTCAGTGTAGTGACCCTTGGC	Wang et al. 2006a
T. melanosporum	MAT1-1-1	P19*	CAATCTCACTCGTGATGTCTGGGTC	Rubini et al. 2011b**
	MAT1-1-1	P20*	TCTCGGGCTGGAGGTGCGGGTCGAGT
	MAT1-2-1	P1*	CAGGTCCGTCATCTCCTTCCAGCAG
	MAT1-2-1	P2*	CCACATGCGACCGAGAATCTTGGCTA
Tuber truffles	EF1α	Tuber_f*	AGCGTGAGCGTGGTATCAC	Bonito et al. 2013**
	EF1α	Tuber_r*	GAGACGTTCTTG ACGTTGAAG
	RPB2	Tuber_f*	YAAYCTGACYTTRGCYGTYAA
	RPB2	Tuber_r*	CRGTTTCCTGYTCAATCTCA
	PKC gene	pkc1f	CCCAAAGGTGGTCACGAAGTGTA	Wang et al. 2006b**
	PKC gene	pkc1r	TGATGAACTCCTTCTTCAGAACC
	β-Tubulin	Bt1a	TTCCCCCGTCTCCACTTCTTCATG
	β-Tubulin	Bt1b	GACGAGATCGTTCATGTTGAACTC

Note: *The special primers; **there are other primers for the target in the reference. The references of black body present available universal or special primers of ITS.