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. 2018 Aug 23;11:229. doi: 10.1186/s13068-018-1228-3

Table 1.

List of investigated glycoside hydrolases of C. stercorarium

Accession number Protein name Modules SP Lit.
AGC67981.1 Bga2B GH2
AGC67186.1 Bga2E GH2
AGC67268.1 Bga2D GH2
AGC67637.1 Bga2C GH2
AGC68382.1 Uid2A GH2
AGC67275.1 Bxl3B GH3 [17]
AGC67337.1 Bgl3Z GH3 [17]
AGC67350.1 GH3
AGC68204.1 GH3, CBM6
AGC68338.1 Nag3A GH3 22 AA
AGC68873.1 Cel9Z GH9, 2× CBM3, 2× CBMX2 27 AA [19, 20]
AGC67515.1 Xyn10E GH10
AGC67677.1 Xyn10C GH10, CBM9, 2× CBM22 29 AA [17, 25]
AGC67715.1 Xyn10B GH10 34 AA [17, 24]
AGC67759.1 Xyn10D GH10
AGC68909.1 Xyn11A GH11, 3× CBM6 30 AA [17, 23]
AGC68130.1 Man26A GH26, CBM35 26 AA
AGC68671.1 GH27
AGC67830.1 GH28
AGC67947.1 GH28
AGC67128.1 GH29
AGC68208.1 Bxl31D GH31
AGC69232.1 Bga35A GH35
AGC68033.1 GH38
AGC67890.1 Bxl39A GH39 [17]
AGC67716.1 Axh43A 2× GH43, CBM6 29 AA
AGC67945.1 Arf43A GH43 [17]
AGC68110.1 Arf43C GH43
AGC68111.1 Abn43A GH43 31 AA
AGC67521.1 Xyl43B GH43 [28]
AGC67885.1 Xyl43A GH43 [27]
AGC69509.1 Bxl43C GH43
AGC67626.1 Arf51B GH51 [17, 56]
AGC68692.1 Gal53A GH53, 4× CBM61 33 AA
AGC69355.1 Agu67A GH67 [30]
AGC68061.1 Ram78A GH78 13 AA [16, 31]
AGC69452.1 GH88
AGC67127.1 GH95
AGC68039.1 Xyn105F GH105
AGC67892.1 GH105
AGC67946.1 GH105
AGC68044.1 GH105
AGC68046.1 GH105
AGC67967.1 GH115 25 AA
AGC67053.1 GH127
AGC67292.1 GH127
AGC67072.1 RamB GHnc
AGC68062.1 BglA GHnc
AGC69032.1 GHnc
AGC69275.1 ArfD GHnc

GenBank accession number, GH family, CBMs, and predicted signal peptide (SP) are listed; enzymes with proven activity are additionally listed with protein name. CBM modules were obtained from the CAZy and the Pfam database [8, 57, 58]. Literature (Lit.) to previously characterised enzymes is indicated. Signal peptides were predicted with the SignalP 4.1 server and a default cutoff value of 0.3 [42]. GHnc Non-classified glycoside hydrolases