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. 2018 Jun 20;35(9):2318–2326. doi: 10.1093/molbev/msy126

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© The Author(s) 2018. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com

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Fig. 5. — Diploid accuracy obtained with LAMP-LD, Loter, and RFMix for simulated admixed Populus individuals as a function of the time since admixture occurred. Admixed individuals are simulated by constructing their genomes from a mosaic of Populus trichocarpa and Populus balsamifera individuals. Individuals are phased using Beagle and two different sets of individuals are used for performing simulations and inference. For each value of the number of generations since admixture, 20 sets of 20 admixed individuals are generated. Boxplots show the distribution of the 20 values for the mean diploid accuracy.