REAGENT or RESOURCE	SOURCE	IDENTIFIER
Antibodies
Anti-BrdU antibody	BD biosciences	Cat#555627; RRID: AB 395993
Anti-mouse IgG	Sigma-Aldrich	Cat#M7023; RRID: AB 260634
Deposited Data
Repli-seq data of five primate species	This paper	GEO: GSE111733
Experimental Models: Cell Lines
Human: lymphoblastoid GM12878	Coriell Cell Repositories	Cat#GM12878; RRID: CVCL 7526
Pan troglodytes (Common Chimpanzee): lymphoblastoid cell line	E. Eichler and M. Ventura (Johnson et al., 2006)	PTR
Pongo pygmaeus (Bornean Orangutan): lymphoblastoid cell line	E. Eichler and M. Ventura (Johnson et al., 2006)	PPY
Nomascus leucogenys (Northern White Cheeked Gibbon): lymphoblastoid cell line	L. Carbone	NLE
Cercopithecus aethiops (Green Monkey): lymphoblastoid cell line	Coriell Cell Repositories	Cat#PR01205; RRID: CVCL 2Y01
Software and Algorithms
Phylo-HMGP	This paper	https://github.com/ma-compbio/Phylo-HMGP
FastQC	web portal	http://www.bioinformatics.babraham.ac.uk/projects/fastqc
FASTX-Toolkit	web portal	http://hannonlab.cshl.edu/fastxtoolkit
Bowtie2	Langmead and Salzberg, 2012	http://bowtie-bio.sourceforge.net/bowtie2/index.shtml
liftOver	Hinrichs et al., 2006	https://genome.ucsc.edu/cgi-bin/hgLiftOver
HMMSeg	Day et al., 2007	https://noble.gs.washington.edu/proj/hmmseg
Other
Repli-seq protocol	Marchal et al., 2018	N/A
Heat-inactivated FBS	Seradigm	Premium Grade HI FBS 1500–500H Lot #: 035B15