Table 1.

Population Branch Statistic (PBS) individual values and Cross-Population Extended Haplotype Homozygosity (XP-EHH) for all SNPs found under selection in Native Andean populations.

SNP	Alelle		Gene	Position	PBS	XPEHH
	Ancestral	Derived				Andean vs. Mesoamerican	p-value	Andean vs. Amazonian	p-value
rs13411586	C*	T	SP100	230988046	0.5846	2.3789	0.0037	2.1703	0.0065
rs9678342	C*	T	SP100	230991955	0.5547	2.3193	0.0044	2.1356	0.0071
rs7582700	T*	C	SP100	231024349	0.4644	2.2704	0.0050	2.1074	0.0076
rs7039618	A	G*	TMEM38B	107497627	0.3618	0.0842	0.3312	0.5672	0.1458
rs3817141	T*	C	TMEM38B	107507950	0.3906	0.0255	0.3099	0.6205	0.1351
rs10978213	G*	A	TMEM38B	107511706	0.3618	0.0235	0.3092	0.6171	0.1358
rs10816302	A*	G	TMEM38B	107526354	0.3835	0.0937	0.2697	0.6664	0.1264
rs10978240	A	G*	TMEM38B	107575093	0.3923	0.0764	0.2753	0.6307	0.1331
rs1046778	T	C*	AS3MT	104651474	0.3124	0.5023	0.5118	0.4008	0.4631
rs269866	G*	A	DUOX2	43181698	0.6185	2.0599	0.0086	2.5865	0.0021
rs440191	A	G*	CLC	44913483	0.3039	1.6207	0.0234	0.3166	0.2046

Ancestral and derived alleles according to the 1000 Genomes data.

^*Putative selected alleles.