Table 4.
GDT loss predicted bt SAAP-QA for the CASP12 blind test set of stage 2 models of 18 target domains.
| Stage 2 (150 models) - Protein Domains | |||
|---|---|---|---|
| Targets | GDT Loss for top 10 ranked | GDT Loss for top 5 ranked | GDT Loss for top 1 ranked |
| T0893-D2 | 0 | 5.77 | 7.55 |
| T0895-D1 | 2.09 | 4.8 | 3.54 |
| T0902-D1 | 0 | 0.1 | 3.35 |
| T0906-D1 | 0.22 | 0.22 | 3.97 |
| T0910-D1 | 1.89 | 2.44 | 2.60 |
| T0911-D1 | 0.37 | 0.37 | 3.49 |
| T0912-D1 | 2.17 | 2.17 | 8.31 |
| T0913-D1 | 1.77 | 1.77 | 1.77 |
| T0917-D1 | 2.5 | 5.12 | 9.36 |
| T0920-D1 | 4.52 | 4.52 | 6.24 |
| T0920-D2 | 4.99 | 8.33 | 7.06 |
| T0921-D1 | 1.45 | 2.71 | 19.21 |
| T0928-D1 | 0.37 | 0.44 | 13.01 |
| T0943-D2 | 0 | 0.62 | 4.03 |
| T0944-D1 | 2.96 | 6.52 | 10.47 |
| T0946-D2 | 0 | 0 | 3.66 |
| T0947-D1 | 3.72 | 8.72 | 6.00 |
| T0948-D1 | 1.85 | 1.85 | 1.68 |
| Average GDT Loss | 1.72 | 3.14 | 6.41 |
GDT loss corresponding to the difference between the best model available in the pool of decoys and the model captured by SAAP-QA, are listed for top 10, top 5 and top 1 category models.