Table 2.

List of regulatory elements for the proposed markers.

Regulatory element	Type	Score	Locus	Gene	Candidate transcription factor binding sites
chr1:91771706–91772840	Intergenic	4.135	chr1:91643029–91920542	CDC7	HNF3ALPHA, HNF4_DR1, HNF4ALPHA, AMEF2, RSRFC4, HMEF2, AML, PEBP, AML1, STAT6, FREAC2, FOXO3, CREBATF, CHOP, PXR, E2F1DP1RB, E2F1DP1, E2F4DP1, TBX5, RFX1, PAX3, RFX1, STAT3, RBPJK, LXR_DR4, MYOGNF1, IK1, STAT6, XPF1, RFX1, BACH2, CDPCR3HD, ACAAT
chr1:91919420–91920093	Intergenic	1.633	chr1:91643029–91920542	CDC7	STAT4, TBP, LHX3, HMEF2, AMEF2, TBP, CHX10, FOXD3, TBP, CEBPGAMMA, POU1F1, TBP, RSRFC4, CMYB, PXR
chr10:57027586–57028282	Intergenic	0.26	chr10:56789214–58787407	ZWINT	GC, TBP, PAX3, PITX2, TCF4, MTATA, CLOX, TAL1BETAE47, TAL1BETAITF2, GZF1, MTATA, DBP
chr2:136325765–136325950	Intron	0.016	chr2:136311296–136380628	MCM6	ATF4
chr2:136350550–136350647	Promoter	1.318	chr2:136311296–136380628	MCM6	E2F1DP1RB, E2F1DP1, E2F1DP2, E2F4DP1, E2F4DP2, E2F1DP1RB, E2F1DP1, E2F1DP2, E2F4DP1, E2F4DP2
chr8:49050687–49050827	Intron	1.251	chr8:49034582–49083547	MCM4	SOX9_B1, CEBPGAMMA,