Table 1.
The relative abundance (%) of some abundant genera and genus-level groups of three forest soil bacterial communitiesa.
| Affiliation | Summer |
Winter |
% of all reads | ||||
|---|---|---|---|---|---|---|---|
| BROAD-Nat | CONIF-80 | CONIF-40 | BROAD-Nat | CONIF-80 | CONIF-40 | ||
| Acidobacteria Gp1 | 24.1 | 22.9 | 20.2 | 20.1 | 22.4 | 20.5 | 21.8 |
| Acidobacteria Gp2∗ | 7.5 | 6.9 | 9.7 | 14.7 | 11.1 | 14.3 | 10.3 |
| Acidobacteria Gp3 | 6.8 | 5.3 | 5.3 | 4.6 | 4.7 | 4.3 | 5.2 |
| Bradyrhizobium∗ | 2.2 | 2.4 | 2.0 | 1.7 | 1.8 | 1.6 | 2.0 |
| Acidobacteria Gp5 | 1.9 | 1.1 | 1.1 | 1.1 | 0.9 | 1.1 | 1.2 |
| Burkholderia∗ | 0.7 | 1.2 | 2.9 | 4.3 | 4.3 | 4.9 | 1.1 |
| Acidobacteria Gp6 | 0.9 | 0.8 | 1.2 | 0.9 | 1.0 | 1.1 | 1.0 |
| Thermosporothrix∗ | 0.6 | 0.6 | 0.7 | 0.8 | 0.8 | 1.0 | 0.8 |
| Rhizomicrobium | 0.7 | 0.8 | 0.5 | 0.7 | 0.8 | 0.4 | 0.8 |
| Mycobacterium | 0.6 | 0.5 | 0.3 | 1.2 | 0.3 | 0.2 | 0.6 |
| Rhodoplanes∗ | 0.5 | 0.5 | 1.4 | 1.7 | 1.7 | 2.4 | 0.5 |
| Aciditerrimonas | 0.3 | 0.5 | 0.5 | 0.5 | 0.5 | 0.3 | 0.5 |
| Granulicella | 0.7 | 0.5 | 0.2 | 0.4 | 0.5 | 0.1 | 0.4 |
| Caulobacter | 0.4 | 0.4 | 0.3 | 0.6 | 0.4 | 0.2 | 0.4 |
| Mucilaginibacter | 0.2 | 0.5 | 0.2 | 0.3 | 0.3 | 0.3 | 0.4 |
| Bacillus | 0.3 | 0.5 | 0.1 | 0.3 | 0.3 | 0.2 | 0.3 |
| Dyella | 0.2 | 0.4 | 0.8 | 0.7 | 1.3 | 1.3 | 0.3 |
| Gemmatimonas∗ | 0.2 | 0.3 | 0.3 | 0.1 | 0.2 | 0.0 | 0.2 |
| Acidobacteria Gp13 | 0.2 | 0.2 | 0.3 | 0.1 | 0.3 | 0.1 | 0.2 |
| Armatimonadetes Gp3 | 0.1 | 0.1 | 0.2 | 0.2 | 0.2 | 0.1 | 0.2 |
| Streptophyta | 0.1 | 0.1 | 0.2 | 0.1 | 0.1 | 0.2 | 0.1 |
| Rhodomicrobium | 0.3 | 0.1 | 0.0 | 0.2 | 0.0 | 0.1 | 0.1 |
| Aquicella∗ | 0.1 | 0.2 | 0.4 | 0.5 | 0.5 | 0.6 | 0.1 |
| Armatimonadetes Gp1 | 0.1 | 0.1 | 0.1 | 0.1 | 0.2 | 0.2 | 0.1 |
| Acidobacteria Gp4 | 0.2 | 0.0 | 0.1 | 0.1 | 0.1 | 0.1 | 0.1 |
| Methylocystis | 0.0 | 0.2 | 0.1 | 0.1 | 0.1 | 0.1 | 0.1 |
| Gaiella | 0.1 | 0.2 | 0.1 | 0.1 | 0.1 | 0.0 | 0.1 |
| Nitrospira∗ | 0.1 | 0.1 | 0.2 | 0.4 | 0.4 | 0.4 | 0.1 |
| Sorangium | 0.0 | 0.1 | 0.1 | 0.1 | 0.1 | 0.1 | 0.1 |
| Ktedonobacter | 0.1 | 0.1 | 0.1 | 0.0 | 0.1 | 0.1 | 0.1 |
| Phenylobacterium | 0.1 | 0.1 | 0.0 | 0.1 | 0.0 | 0.0 | 0.1 |
| Edaphobacter | 0.1 | 0.0 | 0.1 | 0.2 | 0.0 | 0.0 | 0.1 |
| Verrucomicrobia Gp3 | 0.2 | 0.1 | 0.1 | 0.0 | 0.0 | 0.0 | 0.1 |
| Novosphingobium | 0.2 | 0.1 | 0.0 | 0.1 | 0.0 | 0.0 | 0.1 |
| Paenibacillus | 0.1 | 0.1 | 0.0 | 0.0 | 0.0 | 0.0 | 0.1 |
Affiliations with an asterisk indicate a significantly different (P < 0.05) in distribution between seasons analyzed with one way ANOVA. aThe data was based on the results from the Naïve Bayesian rRNA classifier of the RDP. The total reads included in table were about 50% of normalized data.