TABLE 2.
Antibiotic | Susceptibility prediction for Genefinder, Mykrobe, and Typewriter (n)a |
Discordant across methods (n [%]) | |||||
---|---|---|---|---|---|---|---|
RRR | SSS | RRS | RSR | RSS | SRS | ||
Ciprofloxacin | 304 | 1,072 | 0 | 2 | 0 | 1 | 3 (0.2) |
Clindamycin | 338 | 1,024 | 7 | 0 | 0 | 10 | 17 (1.2) |
Erythromycin | 354 | 1,011 | 6 | 0 | 0 | 8 | 14 (1.2) |
Fusidic acid | 151 | 1,221 | 4 | 0 | 0 | 3 | 7 (0.5) |
Gentamicin | 76 | 1,300 | 1 | 0 | 0 | 2 | 3 (0.2) |
Methicillin | 393 | 984 | 2 | 0 | 0 | 0 | 2 (0.1) |
Mupirocin | 15 | 1,362 | 0 | 0 | 2 | 0 | 2 (0.1) |
Penicillin | 1,161 | 211 | 3 | 0 | 0 | 4 | 7 (0.5) |
Rifampin | 23 | 1,354 | 0 | 1 | 0 | 1 | 2 (0.1) |
Tetracycline | 121 | 1,249 | 4 | 0 | 0 | 5 | 9 (0.7) |
Trimethoprim | 175 | 1,199 | 3 | 1 | 0 | 1 | 5 (0.4) |
Vancomycin | 0 | 1,379 | 0 | 0 | 0 | 0 | 0 (0.0) |
Total (% of 16,548) | 3,111 (18.8) | 13,366 (80.8) | 30 (0.2) | 4 (0.02) | 2 (0.01) | 35 (0.2) | 71 (0.4) |
n = 1,379. R, resistant; S, susceptible.