Fig. 4.

Alignment between the Djth fosmid insert sequence and its corresponding genome scaffold. In the illustration of the Djth fosmid structure, green arrowheads show the 10th and 11th exons of the Djth gene in the fosmid (see Fig. 2). In the illustration of the Djth fosmid repeated sequences, red bars represent repetitive sequences. In the illustration of the alignment between Djth fosmid and scaffold, pink blocks show matched sequences between the fosmid and the corresponding scaffold, while white blocks show mismatches, which were mainly caused by gaps in the scaffold