Table 1.

Functional annotation of ubiquitinated proteins of mouse brain mitochondria in GO terms.

Accession Number	UniProt ID	Recommended Protein Name	Sample Type				Extramitochondrial Compartment	Intramitochondrial Compartment	Molecular Function
			Control	MPTP	MPTP+isatin	Isatin			Antioxidant Activity	Binding	Catalytic Activity	Other
CATD_MOUSE	P18242	Cathepsin D			●		●				●
APR_MOUSE	Q9JM54	Phorbol-12-myristate-13-acetate-induced protein 1			●		●
TAP1_MOUSE	P21958	Antigen peptide transporter 1	●				●			●	●	●
AKT1_MOUSE	P31750	RAC-alpha serine/threonine-protein kinase	●				●			●	●	●
KPYM_MOUSE	P52480	Pyruvate kinase PKM	●				●			●	●
ACSS3_MOUSE	Q14DH7	Acyl-CoA synthetase short-chain family member 3, mitochondrial	●					●		●	●
AL4A1_MOUSE	Q8CHT0	Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial	●					●		●	●
NALP5_MOUSE	Q9R1M5	NACHT, LRR and PYD domains-containing protein 5	●				●			●
AT2A1_MOUSE	Q8R429	Sarcoplasmic/endoplasmic reticulum calcium ATPase 1		●		●	●			●	●
SUCA_MOUSE	Q9WUM5	Succinate-CoA ligase (ADP/GDP-forming) subunit alpha, mitochondrial		●		●		●		●	●
OAT_MOUSE	P29758	Ornithine aminotransferase, mitochondrial		●				●		●	●
MRP9_MOUSE	Q80WJ6	Multidrug resistance-associated protein 9		●			●			●	●
DLDH_MOUSE	O08749	Dihydrolipoyl dehydrogenase, mitochondrial			●			●		●	●	●
CATB_MOUSE	P10605	Cathepsin B			●		●			●	●
CLH1_MOUSE	Q68FD5	Clathrin heavy chain 1			●		●			●
ADCYA_MOUSE	Q8C0T9	Adenylate cyclase type 10			●		●			●	●
FPPS_MOUSE	Q920E5	Farnesyl pyrophosphate synthase			●		●			●	●
AATM_MOUSE	P05202	Aspartate aminotransferase, mitochondrial				●		●		●	●
ERAL1_MOUSE	Q9CZU4	GTPase Era, mitochondrial				●		●		●
TO20L_MOUSE	Q9D4V6	TOMM20-like protein 1				●	●			●		●
PRDX1_MOUSE	P35700	Peroxiredoxin-1		●	●	●	●		●	●
GSHR_MOUSE	P47791	Glutathione reductase, mitochondrial		●				●	●	●		●

Notes: color shows (extra) mitochondrial localization of the proteins.