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. 2018 Aug 2;9(8):396. doi: 10.3390/genes9080396

Table 1.

Metadata and molecular characterization of L. monocytogenes isolates used in this study.

Isolates Origin 1 Source Isolation Date Geographic Location 2 Pulse Type 3 Serogroup 4 Sequence Type 4 Clonal Complex 4
T1-001 Clinical Amniotic fluid 2009 Santiago 167 IIc ST9 CC9
T1-002 Clinical Blood 2010 Santiago 3 IIa ST7 CC7
T1-003 Clinical Cerebrospinal fluid 2011 Los Lagos 114 IIa ST8 CC8
T1-004 Clinical Cerebrospinal fluid 2011 Santiago 260 IIb ST392 -
T1-005 Clinical Cerebrospinal fluid 2010 Valparaiso 19 IIb ST5 CC5
T1-006 Clinical Blood 2010 Aysén 48 IVb ST1 CC1
T1-007 Clinical Blood 2010 Santiago 197 IVb ST1 CC1
T1-008 Clinical Cerebrospinal fluid 2011 Araucanía 235 IVb ST1 CC1
T1-009 Clinical Amniotic fluid 2011 Santiago 252 IVb ST1 CC1
T1-010 Clinical Blood 2011 O’Higgins 264 IVb ST1 CC1
T1-011 Food Ham 2010 Santiago 167 IIa ST8 CC8
T1-012 Food Sausage 2010 Los Lagos 147 IIb ST3 CC3
T1-013 Food Ice cream 2010 Santiago 212 IIb ST5 CC5
T1-014 Food Sausage 2010 Los Lagos 210 IIc ST9 CC9
T1-016 Food Ham 2010 Santiago 211 IVb ST1207 CC6
T1-017 Food Ham 2010 Santiago 99 IIc ST9 CC9
T1-018 Food Ice cream 2010 Santiago 156 IVb ST1395 7 CC6
T1-019 Environment Food plant N/A Bío-Bío N/A IVb ST6 CC6
T1-020 Environment Food plant N/A Bío-Bío N/A IIa ST121 CC121
T1-022 Clinical Blood 2011 Valparaiso 256 IVb ST1 CC1
T1-023 Clinical Blood 2008 Santiago 9 5 IVb ST1 CC1
T1-024 Clinical Blood 2008 O’Higgins 9 5 IVb ST1 CC1
T1-025 Clinical Blood 2010 Santiago 99 IVb ST1 CC1
T1-026 Food Sausage 2010 Los Lagos 2 IIc ST9 CC9
T1-027 Clinical Blood 2010 Santiago 46 IIa ST7 CC7
T1-028 Clinical Blood 2008 Bío-Bío 9 5 IVb ST1 CC1
T1-029 Food Pork pate 2010 Araucanía 126 IVb ST2 CC2
T1-030 Food Sausage 2009 Bío-Bío 1 6 IIa ST9 CC9
T1-031 Clinical Human 2010 O’Higgins 20 IVb ST1 CC1
T1-033 Clinical Blood 2010 Araucanía 133 IVb ST1 CC1
T1-034 Food Ice cream 2010 Santiago 64 IIb ST5 CC5
T1-037 Clinical Peritoneal fluid 2011 Bío-Bío 137 IIa ST37 CC37
T1-038 Food Ham 2010 Santiago 53 IIa ST121 CC121
T1-039 Clinical Cerebrospinal fluid 2010 Santiago 209 IVb ST2 CC2
T1-040 Food Beef 2009 Bío-Bío 1 6 IIc ST9 CC9
T1-041 Clinical Blood 2011 Bío-Bío 245 IVb ST1 CC1
T1-042 Food Cheese 2009 Santiago 9 5 IVb ST1 CC1
T1-043 Clinical Blood 2010 Santiago 58 IVb ST1 CC1

N/A: Not available. 1 All clinical cases were obtained from humans. 2 For details on geographic origin within Chile, see Figure S1. 3 Pulsed Field Gel Electrophoresis (PFGE) were typed at the Chilean Institute of Public Health. 4 Identified in this study. 5 PFGE type was involved in outbreak 2008. 6 PFGE type was involved in outbreak 2009. 7 Novel sequence type.