Table 1.
Length | 7,345,249 bp |
G + C content | 61.47% |
CDS | 6874 |
rRNA | 3 |
tRNA | 53 |
Miscellaneous RNA | 33 |
Scaffolds | 45 |
Scaffold N50 (L50) | 4400,487 (1) |
CDS with COG terms *,† | 64.00% |
CDS with GO terms * | 28.70% |
CDS with KEGG pathway terms * | 35.50% |
CDS with eggNOG annotations *,¥ | 80.50% |
CDS with no similarity * | 9.40% |
* As determined using eggnog-mapper [24]. Those genes not returned in the eggNOG-mapper output were said to have no similarity; † Excluding those annotated with COG category S (unknown function); ¥ Excluding those annotated as protein/domain of unknown/uncharacterized function. CDS (Coding Sequences); COG (Cluster of Orthologous Genes); KEGG (Kyoto Encyclopedia of Genes and Genomes); GO (Gene Ontology).