Table 6.
Associations between maternal untransmitted alleles and candidate lipid species’ peak intensity
SNP | Gene | Lipid | Discovery Cohort | Validation Cohort | Meta-Analysis | |||||
---|---|---|---|---|---|---|---|---|---|---|
R | p-value | n | R | p-value | n | R | p-value | |||
rs10839220 | KRTAP5–6 | TG(44:1) | 0.113 | 0.16 | 154 | 0.067 | 0.38 | 179 | 0.09 (−0.02, 0.19) | 0.05 |
rs10839220 | KRTAP5–6 | LysoPCP(18:0) | 0.095 | 0.24 | 154 | 0.114 | 0.10 | 213 | 0.11 (0, 0.21) | 0.02 |
rs10839220 | KRTAP5–6 | PE(34:0) | 0.068 | 0.54 | 154 | 0.042 | 0.40 | 213 | 0.05 (−0.05, 0.15) | 0.16 |
rs10839220 | KRTAP5–6 | DG(36:3) | 0.122 | 0.13 | 154 | 0 | 0.98 | 190 | 0.06 (−0.06, 0.17) | 0.18 |
rs4752779 | FAM99B | TG(44:1) | 0.020 | 0.81 | 161 | 0.054 | 0.47 | 185 | 0.04 (−0.07, 0.14) | 0.24 |
rs7131362 | FAM99A | TG(44:1) | 0.119 | 0.14 | 153 | 0.050 | 0.51 | 175 | 0.08 (−0.03, 0.19) | 0.07 |
rs7131362 | FAM99A | TG(48:0) | 0.080 | 0.43 | 153 | 0.065 | 0.26 | 198 | 0.07 (−0.03, 0.18) | 0.09 |
rs17073273 | PLAGL1 | TG(44:1) | 0.131 | 0.09 | 170 | 0.024 | 0.74 | 201 | 0.07 (−0.03, 0.18) | 0.09 |
rs17073273 | PLAGL1 | TG(55:9) | 0 | 0.98 | 170 | 0.123 | 0.06 | 228 | 0.07 (−0.05, 0.19) | 0.13 |
rs17073273 | PLAGL1 | TG(48:0) | 0.094 | 0.22 | 170 | 0.067 | 0.31 | 228 | 0.08 (−0.02, 0.18) | 0.06 |
rs2268445 | PLAGL1 | TG(44:1) | 0.092 | 0.23 | 172 | 0.022 | 0.76 | 201 | 0.05 (−0.05, 0.16) | 0.15 |
Only those lipid species that tagged components with significant fitted models in Metaboanalyst using maternally-transmitted fetal variants are shown