Table 4. Peaks associated with abundant siRNA production (from all full-length TRI6 RNAi mutant strains analyzed).
Peak | Length | Count | % of mapped reads | sense/anti-sense | 5' | 3' | %GC |
---|---|---|---|---|---|---|---|
1 | 50 | 8120 | 2.11 | sense | 1 | 50 | 62.0 |
2 | 50 | 8916 | 2.31 | anti-sense | 51 | 100 | 52.0 |
3 | 50 | 95372 | 24.75 | sense/anti-sense | 361 | 410 | 56.0 |
4 | 50 | 92526 | 24.01 | anti-sense | 428 | 477 | 52.0 |
5 | 50 | 88688 | 23.02 | sense | 478 | 527 | 60.0 |
6 | 50 | 20219 | 5.25 | anti-sense | 542 | 591 | 52.0 |
Low GC% | 50 | 77 | 0.02 | - | 107 | 156 | 34.0 |
TRI6 | 607 | - | - | - | 1 | 607 | 50.4 |