Table 1.

Sex-combined fine-mapping loci for WHRadjBMI with different counts of SNPs related to imputation, original GWAS p-values, and final results calculated by PAINTOR

Locus	Nearest gene	Chr	Index GWA hits rs ID (hg19 HGVS identifier)	Number of SNPs before imputation	Number of SNPs after DIST imputation	Number of SNPs achieving genome-wide significance	Number of SNPs Identified by PAINTOR
1	TBX15-WARS2	1	rs2645294 chr1:g.119574587C>T	161	365	55	2
2	DNM3-PIGC	1	rs714515 chr1:g.172352990G>A	93	236	51	1
3	MEIS1	2	rs1385167 chr2:g.66200648A>G	162	431	14	1
4	CALCRL	2	rs1569135 chr2:g.188115398A>G	88	317	3	2
5	PBRM1	3	rs2276824 chr3:g.52637486C>G	93	295	5	1
6	LEKR1	3	rs17451107 chr3:g.156797609T>C	83	276	15	0
7	SPATA5-FGF2	4	rs303084 chr4:g.124066948G>A	115	427	1	0
8	CPEB4	5	rs7705502 chr5:g.173320815G>A	189	391	72	2
9	FGFR4	5	rs6556301 chr5:g.176527577G>T	51	362	1	0
10	LY86	6	rs1294410 chr6:g.6738752T>C	155	402	50	0
11	BTNL2	6	rs7759742 chr6:g.32381736T>A	352	1586	19	2
12	RSPO3	6	rs1936805 chr6:g.127452116C>T	182	321	150	1
13	HOXA11	7	rs10245353 chr7:g.25858614C>A	131	276	84	2
14	NFE2L3	7	rs7801581 chr7:g.27223771C>T	121	247	2	2
15	MSC	8	rs12679556 chr8:g.72514228T>G	157	379	5	2
16	ABCA1	9	rs10991437 chr9:g.107735920C>A	131	569	7	0
17	ITPR2-SSPN	12	rs10842707 chr12:g.26471364C>T	44	371	52	1
18	CCDC92	12	rs4765219 chr12:g.124440110C>A	68	284	116	2
19	KLF13	15	rs8042543 chr15:g.31708263C>T	83	350	1	1
20	RFX7	15	rs8030605 chr15:g.56504598G>A	134	385	2	1
21	SMAD6	15	rs1440372 chr15:g.67033151T>C	121	329	2	1
22	PEMT	17	rs4646404 chr17:g.17420199G>A	82	304	10	1
23	JUND	19	rs12608504 chr19:g.18389135A>G	84	385	2	2
24	CEBPA	19	rs4081724 chr19:g.33824946G>A	64	392	33	2
25	BMP2	20	rs979012 chr20:g.6623374T>C	142	303	13	2
26	EYA2	20	rs6090583 chr20:g.45558831A>G	170	378	27	2
27	ZNRF3	22	rs2294239 chr22:g.29449477A>G	118	364	9	0
Total				3374	10,725	801	33