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. 2018 Aug 30;19:643. doi: 10.1186/s12864-018-5033-y

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© The Author(s). 2018

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 2 — Significant changes in gene expression in response to heat stress and/or LPS. Genes with significant DE (q-value < 0.05, |log₂FC| ≥ 1.0) were determined using DESeq2 [39] to perform pairwise comparisons (n = 3–4 samples/treatment/line) against Thermoneutral + Saline. Differential expression (DE), lipopolysaccharide (LPS), log₂ fold change (log₂FC), number of significant genes (N), up-regulated (red upward bars), down-regulated (green downward bars)