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. 2018 Aug 31;15:28. doi: 10.1186/s12014-018-9204-2

Table 1.

Differential induction of major outer membrane proteins of Acinetobacter baumannii DU202 OMV according to imipenem treatment

Locus_tag Description Localization Log ratioa OMVLBb OMVimipenemb
DU202_RS06415 Carbapenem-hydrolyzing class D beta-lactamase OXA-23 Cytoplasmic 0.923 4.3782 36.682
DU202_RS02680 Tail-specific protease OuterMembrane 0.855 0.037 0.262
DU202_RS15465 Lipoprotein NlpD Periplasmic 0.69 0.051 0.251
DU202_RS16100 Tol–Pal system beta propeller repeat protein TolB OuterMembrane 0.53 0.168 0.57
DU202_RS19805 Transporter OuterMembrane 0.461 0.078 0.225
DU202_RS12145 Outer membrane protein assembly factor BamA OuterMembrane 0.46 0.111 0.319
DU202_RS11840 TonB-dependent siderophore receptor OuterMembrane 0.439 0.045 0.123
DU202_RS15930 Putative serine protease OuterMembrane 0.413 0.326 0.844
DU202_RS18760 Superoxide dismutase (Cu–Zn) Periplasmic 0.366 0.762 1.77
DU202_RS20255 M23 family peptidase Periplasmic 0.365 0.051 0.119
DU202_RS01660 Outer membrane protein W precursor Periplasmic 0.265 0.49 0.903
DU202_RS04315 Outer membrane protein assembly factor BamD OuterMembrane 0.244 0.106 0.186
DU202_RS17430 Outer membrane protein A precursor OuterMembrane 0.196 1.775 2.789
DU202_RS00390 FKBP-type peptidyl-prolyl cis–trans isomerase OuterMembrane 0.178 0.083 0.125
DU202_RS10675 Putative bacteriophage Mu Gp45 protein Periplasmic − 0.579 0.112 0.03
DU202_RS16695 Succinate dehydrogenase flavoprotein subunit Cytoplasmic − 0.586 0.158 0.041
DU202_RS17820 Preprotein translocase subunit YajC InnerMembrane − 0.592 0.18 0.046
DU202_RS14050 Phage head–tail adapter protein Cytoplasmic − 0.61 0.149 0.037
DU202_RS09385 Phage major capsid protein Periplasmic − 0.632 1.084 0.253
DU202_RS04220 Peptidoglycan-binding protein LysM Periplasmic − 0.7 0.12 0.024
DU202_RS05710 Copper resistance protein NlpE Extracellular − 0.743 0.447 0.081
DU202_RS09380 HK97 family phage prohead protease Cytoplasmic − 0.75 0.214 0.038
DU202_RS10720 Phage tail sheath-like protein Periplasmic − 0.767 0.175 0.03
DU202_RS13995 Lytic transglycosylase domain-containing protein OuterMembrane − 0.8 0.16 0.025
DU202_RS14000 Methyl-coenzyme M reductase OuterMembrane − 0.967 0.482 0.052
DU202_RS16690 Succinate dehydrogenase iron-sulfur subunit Cytoplasmic − 1.307 0.154 0.008
DU202_RS09375 Phage portal protein OuterMembrane − 1.522 0.718 0.022

aInduction ratio was calculated as OMVLB per OMVIM

bAbundance was indicated as mol%