Table 4.

Top 40 genes coexpressed with MED23 according to mutual rank

AGI	ALIAS	FUNCTION	MUTUAL RANKa
AT1G02080b	transcription	transcription regulators	6.9
AT1G48090	calcium-dependent lipid-binding	calcium-dependent lipid-binding family protein	7.1
AT1G80070b	SUS2	Pre-mRNA-processing-splicing factor	7.9
AT5G58410	HEAT/U-box	HEAT/U-box domain-containing protein	13
AT4G39850	PXA1	peroxisomal ABC transporter 1	13.8
AT3G13330	PA200	proteasome activating protein 200	16.2
AT3G02260b	UMB1	auxin transport protein (BIG)	17.2
AT1G50030b,c	TOR	target of rapamycin	17.3
AT5G23110	Zinc finger	Zinc finger, C3HC4 type (RING finger) family protein	20.4
AT4G01290	chorismate synthase	chorismate synthase	20.5
AT2G26780	ARM repeat	ARM repeat superfamily protein	22.4
AT3G27670	RST1	ARM repeat superfamily protein	22.9
AT2G17930	Phosphatidylinositol 3- and 4-kinase	Phosphatidylinositol 3- and 4-kinase family protein with FAT domain	23.8
AT1G20960b	emb1507	U5 small nuclear ribonucleoprotein helicase, putative	25.1
AT1G54490b	XRN4	exoribonuclease 4	26.3
AT2G41700	ABCA1	ATP-binding cassette A1	29.1
AT1G15780	NRB4/MED15a	Mediator subunit 15a	29.7
AT5G61140b	helicase	U5 small nuclear ribonucleoprotein helicasea	30.7
AT5G51340	Tetratricopeptide repeat (TPR)-like	Tetratricopeptide repeat (TPR)-like superfamily protein	31.4
AT3G57570	ARM repeat	ARM repeat superfamily protein	31.9
AT5G15680	ARM repeat	ARM repeat superfamily protein	33
AT4G00450c	MED12	RNA polymerase II transcription mediators	33.5
AT3G15880c	WSIP2	WUS-interacting protein 2	34.3
AT3G51050	FG-GAP repeat	FG-GAP repeat-containing protein	37.5
AT3G16830c	TPR2	TOPLESS-related 2	40.3
AT3G50590	Transducin/WD40 repeat-like	Transducin/WD40 repeat-like superfamily protein	45.2
AT1G72390	PHL	Phytochrome-dependent late-flowering	45.5
AT3G60240	EIF4G	eukaryotic translation initiation factor 4G	48
AT5G16280	Tetratricopeptide repeat (TPR)-like	Tetratricopeptide repeat (TPR)-like superfamily protein	48.6
AT3G08850c	RAPTOR1B	HEAT repeat; WD domain, G-beta repeat protein protein	49
AT1G55325c	MAB2/MED13	RNA polymerase II transcription mediators	49.9
AT5G47010b	UPF1	RNA helicase, putative	50.2
AT3G33530	Transducin	Transducin family protein / WD-40 repeat family protein	52
AT2G32730	proteasome	26S proteasome regulatory complex, Rpn2/Psmd1 subunit	52.5
AT5G65750	2-oxoglutarate dehydrogenase	2-oxoglutarate dehydrogenase, E1 component	54
AT3G07160	GSL10	glucan synthase-like 10	54.7
AT2G28290c	SYD	P-loop containing nucleoside triphosphate hydrolases superfamily protein	55.1
AT2G33730b	hydrolase	P-loop containing nucleoside triphosphate hydrolases superfamily protein	55.6
AT5G51660b	CPSF160	cleavage and polyadenylation specificity factor 160	58.8
AT3G50380	DUF1162	Protein of unknown function (DUF1162)	59

^aBased on ATTED-II data set Ath-m.v15-08.

^bGenes annotated as being involved in RNA processing.

^cGenes annotated as being involved in embryo, floral or meristem development.