Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2018 Sep;28(9):1333–1344. doi: 10.1101/gr.228163.117

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

© 2018 Kakrana et al.; Published by Cold Spring Harbor Laboratory Press

This article is distributed exclusively by Cold Spring Harbor Laboratory Press for the first six months after the full-issue publication date (see http://genome.cshlp.org/site/misc/terms.xhtml). After six months, it is available under a Creative Commons License (Attribution-NonCommercial 4.0 International), as described at http://creativecommons.org/licenses/by-nc/4.0/.

PMC Copyright notice

Figure 2. — Many Asparagus 24-PHAS loci are derived from inverted repeats. (A) Genomic organization of two representative IR-type PHAS loci, overlapping with the 5′ and 3′ arm of inverted repeats. Phasing scores from sliding window analysis are presented as shown in our custom web viewer. Loci with score >25 were considered as phased loci. (B) Fold change representing enrichment or depletion of overlap of 24-PHAS loci from rice, Asparagus, and maize, with exons, introns, transposons, and inverted repeats, versus random chance. The complete data are in Supplemental Table S5. (C) Comparison of sRNA abundances and unique sRNA counts of sRNAs produced from 24-PHAS loci from rice, Asparagus, and maize. The values on top represent 2.5% trimmed mean of ratio of abundances or counts of 24-nt phasiRNAs from all 24-PHAS loci of corresponding species.