| AAD | ATR activating domain (in TopBP1) |
| ATM | Serine-protein kinase ATM |
| ATR | Serine/threonine-protein kinase ATR |
| BSA | Bovine serum albumin |
| Cdc45 | Cell division control protein 45 homolog |
| Cdc6 | Cell division control protein 6 homolog |
| Cdt1 | DNA replication factor Cdt1 |
| Chk1 | Serine/threonine-protein kinase Chk1 |
| CldU | 5-Chloro-2′-deoxyuridine |
| CMG | Cdc45-MCM-GINS complex |
| DDK | Dbf4-dependent kinase |
| EdU | 5-Ethynyl-2′-deoxyuridine |
| ETAA1 | Ewing’s tumor-associated antigen 1 |
| eGFP | Enhanced green fluorescent protein |
| GEMC1 | Geminin coiled-coil domain-containing protein 1 |
| GINS | Sld5-Psf1-Psf2-Psf3 complex (go-ichi-ni-san) |
| H2A.X/γH2AX | Phosphorylated histone H2AX |
| IdU | 5-iodo-2′-deoxyuridine |
| kb | kilobase |
| MCM2-7 | DNA replication licensing factor MCM2-7 |
| ORI | Origin of DNA replication |
| p21 | Cyclin-dependent kinase inhibitor 1 |
| p27 | Cyclin-dependent kinase inhibitor 1B |
| p53 | Cellular tumor antigen p53 |
| PARP | Poly (ADP-ribose) polymerase |
| PBS | Phosphate-buffered saline |
| RecQL4 | ATP-dependent DNA helicase Q4 |
| RPA | Replication protein A complex |
| S-CDK | S-phase-specific cyclin dependent kinase |
| SA-β-Gal | Senescence-associated beta-galactosidase |
| ssDNA | Single-stranded DNA |
| TopBP1 | DNA topoisomerase 2-binding protein 1 |
| U2OS | Human osteosarcoma cell line |
| UV-C | Ultraviolet C (254 nm) |
| WT | Wild type |