Table 3.
List of genes annotated in the cp genomes of Q. acutissima sequenced in this study.
| Function | Genes |
|---|---|
| RNAs, transfer | trnH-GUG, trnK-UUU, trnQ-UUG, trnS-GCU, trnG-GCC, trnR-UCU, trnC-GCA, trnD-GUC, trnY-GUA, trnE-UUC, trnT-GGU, trnM-CAU, trnS-UGA, trnG-GCC, trnfM-CAU, trnS-GGA, trnT-UGU, trnL-UAA, trnF-GAA, trnV-UAC, trnM-CAU, trnT-GGU, trnW-CCA, trnP-UGG, trnP-GGG, trnI *-CAU, trnL-CAA *, trnV-GAC, trnI-GAU *, trnA-UGC, trnR-ACG, trnN-GUU, trnL-UAG, trnN-GUU, trnR-ACG, trnA-UGC, trnV-GAC |
| RNAs, ribosomal | rrn23 *, rrn16 *, rrn5 *, rrn4.5 * |
| Transcription and splicing | rpoC1 *, rpoC2, rpoA, rpoB |
| Translation, ribosomal proteins | |
| Small subunit | rps2, rps3, rps4, rps7, rps8, rps11, rps12 **, rps14, rps15, rps16 *, rps18, rps19 |
| Large subunit | rpl2 *, rpl14, rpl16 *, rpl20, rpl22, rpl23, rpl32, rpl33, rpl36 |
| Photosynthesis | |
| ATP synthase | atpE, atpB, atpA, atpF *, atpH, atpI |
| Photosystem I | psaI, psaB, psaA, psaC, psaJ, ycf3 *, ycf4 |
| Photosystem II | psbD, psbC, psbZ, psbT, psbH, psbK, psbI, psbJ, psbF, psbE, psbM, psbN, psbL, psbA, psbB |
| Calvin cycle | rbcL |
| Cytochrome complex | petN, petA, petL, petG, petB *, petD * |
| NADH dehydrogenase | ndhB *, ndhI, ndhK, ndhC, ndhF, ndhD, ndhG, ndhE, ndhA, ndhH, ndhJ |
| Others | inFA, ycf15 *, ycf1 *, ycf2 *, accD, cemA, ccsA, clpP ** |
* Genes containing one intron; ** genes containing two introns.