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. 2018 Aug 7;19(8):2315. doi: 10.3390/ijms19082315

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© 2018 by the authors.

Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).

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Methylation of transposable elements (TEs) in the genomes of Prunus mume. (a) Distribution of TEs density within gene body and 2-kb upstream and downstream domains. (b) Distribution of methylated TEs according to sequence context (mCG, mCHG, and mCHH) in intergenic (red) and intragenic (blue) domains. WT and RT indicate white petal tissues and red petal tissues, respectively. Class I and class II refer to class-I and class-II TEs, respectively. (c) Genome-wide length percentages of differentially methylated regions (DMRs) within TEs and other different functional regions (leftmost bar) and the methylome-wide percentage distributions of DMRs with different methylation types in different functional regions.