Table 1.
Gene | Primer Sequences | Product Size (bp) | Annealing Temp (°C) | Accession No. |
---|---|---|---|---|
RUNX2 | F: 5′-ATGTGTGTTTGTTTCAGCAG-3′ | 199 | 60 | NM_001024630.3 |
R: 5′-TCCCTAAAGTCACTCGGTAT-3′ | ||||
ON | F: 5′-GTGCAGAGGAAACCGAAGAG-3′ | 202 | 60 | J03040.1 |
R: 5′-AAGTGGCAGGAAGAGTCGAA-3′ | ||||
BMP2 | F: 5′-TAGACCTGTATCGCAGGCAC-3′ | 149 | 60 | NM_001200.2 |
R: 5′-GGTTGTTTTCCCACTCGTTT-3′ | ||||
PPARγ2 | F: 5′-TGCTGTCATTATTCTCAGTGGA-3′ | 124 | 60 | AB565476.1 |
R: 5′-GAGGACTCAGGGTGGTTCAG-3′ | ||||
FABP4 | F: 5′-TGAGATTTCCTTCATACTGGG-3′ | 128 | 60 | NM_001442.2 |
R: 5′-TGGTTGATTTTCCATCCCAT-3′ | ||||
LPL | F: 5′-AGACACAGCTGAGGACACTT-3′ | 137 | 60 | NM_000237.2 |
R: 5′-GCACCCAACTCTCATACATT-3′ | ||||
SOX9 | F: 5′-ATGGAGCAGCGAAATCAACG-3′ | 118 | 60 | BC007951.2 |
R: 5′-CAAAGTCCAAACAGGCAGAGAG-3′ | ||||
AGGRECAN | F: 5′-GAATGGGAACCAGCCTATACC-3′ | 98 | 60 | NM_001135.3 |
R: 5′-TCTGTACTTTCCTCTGTTGCTG-3′ | ||||
COLLAGEN II | F: 5′-GAGACCTGAAACTCTGCCACC-3′ | 165 | 55 | NM_001844.4 |
R: 5′-TGCTCCACCAGTTCTTCTTGG-3′ | ||||
ChAT | F: 5′-AGCAGAAATGCAGCCCTGAT-3′ | 182 | 60 | NM_001142933.1 |
R: 5′-GTCAGTCACGGCTCTCACAA-3′ | ||||
HB9 | F: 5′-CAAGCTCAACAAGTACCTGT-3′ | 134 | 56 | NM_001165255.1 |
R: 5′-GCTCTTTGGCCTTTTTGCTG-3′ | ||||
ISL1 | F: 5′-TGGTCATTGCCTTGCCAAAC-3′ | 106 | 56 | XM_011543380.2 |
R: 5′-TCAAACCAATGCAGCTCCAC-3′ | ||||
YWHAZ (reference) | F: 5′-CTTCACAAGCAGAGAGCAAAG-3′ | 102 | 55 | NM_003406.3 |
R: 5′-CGACAATCCCTTTCTTGTCATC-3′ |
Abbreviation: F, forward primer sequence; R, reverse primer sequence; RUNX2, runt-related transcription factor 2; ON, osteonectin; BMP2, bone morphogenetic protein 2; PPARγ2, peroxisome proliferator activated receptor- γ2; FABP4, fatty acid binding protein 4; LPL, lipoprotein lipase; SOX9, sex determining region Y-box 9; AGGRECAN, cartilage-specific proteoglycan core protein; COLLAGEN II, type II collagen; ChAT, choline acetyltransferase; HB9, homeobox HB9; ISL1, insulin gene enhancer protein ISL-1; YWHAZ, Tyrosine 3-monooxygenease/ tryptophan 5-monooxygenease activation protein, zeta polypeptide.