Fig. 6.

Detection of selective sweeps in the YRI population. a Selected top genes (threshold set to 99.95%) identified as targets of positive selection for all chromosomes in the YRI population (full list provided in Supplementary Table 1). b-d The results of SweeD, OmegaPlus, and RAiSD for chromosome 14, in comparison with the results of S/HIC. S/HIC is a machine learning tool, thus each region is classified as neutral (dark-gray), linked soft (light blue), soft (purple), linked hard (pink), and hard (red). For clarity, hard-sweep regions are also denoted by a red dot at the top of each plot. e Common outliers between CMS and RAiSD for chromosome 14