TABLE 4.
Gene (ID) | Referencea |
Mutationb |
No. of isolates |
Prevalence (% [95% CI])d | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Codon position | AAc | Codon | AA | Codon | Base position | PCR positive | Sequenced | With mutation | ||
pfmdr1 (PF3D7_0523000) | 102 | G | ggt | G | ggC | 306 | 4 | 2.07 (0.06–4.08) | ||
102 | G | ggt | G | ggC/T | 306 | 4 | 2.07 (0.06–4.08) | |||
130 | E | gaa | K/E | A/Gaa | 388 | 211 | 193 | 1 | 0.52 (−0.49–1.53) | |
156 | D | gat | N | Aat | 466 | 1 | 0.52 (−0.49–1.53) | |||
182 | G | ggt | G | ggG | 546 | 1 | 0.52 (−0.49–1.53) | |||
182 | G | ggt | G | ggG/T | 546 | 1 | 0.52 (−0.49–1.53) | |||
1069 | T | act | T | acG | 3207 | 11 | 5.29 (2.25–8.33) | |||
1069 | T | act | T | acG/T | 3207 | 2 | 0.96 (−0.37–2.29) | |||
1113 | G | ggt | A | gCt | 3338 | 211 | 208 | 1 | 0.48 (−0.46–1.42) | |
1142 | P | cct | P | ccA | 3426 | 1 | 0.48 (−0.46–1.42) | |||
1157 | T | aca | T | acG | 3471 | 1 | 0.48 (−0.46–1.42) | |||
1196 | D | gat | N | Aat | 3586 | 2 | 0.96 (−0.37–2.29) | |||
1226 | F | ttt | Y | tAt | 3677 | 1 | 0.48 (−0.46–1.42) | |||
1230 | G | gga | G | ggC | 3690 | 1 | 0.48 (−0.46–1.42) | |||
k13-propeller (PF3D7_1343700) | 550 | S | tct | S | tcC | 1650 | 199 | 184 | 2 | 1.09 (−0.41–2.59) |
561 | R | cgt | H | cAt | 1682 | 1 | 0.54 (−0.52–1.6) | |||
575 | R | aga | R/K | aA/Ga | 1724 | 1 | 0.54 (−0.52–1.6) | |||
589 | V | gtc | I | Atc | 1765 | 1 | 0.54 (−0.52–1.6) |
Reference sites are underlined.
Mutation sites are underlined.
AA, amino acid residue.
CI, confidence interval.