Table 7.
Microbial species associated with different skin status
| Feature | Log(highestClassAvg) | Class | LDA effect size | p value |
|---|---|---|---|---|
| f__Propionibacteriaceae_g__Propionibacterium_s__acnes | 5.57 | Healthy | 4.87 | 1.92E−04 |
| f__Propionibacteriaceae_g__Propionibacterium_s__granulosum | 3.96 | Healthy | 3.41 | 1.36E−02 |
| f__Coriobacteriaceae_g__Atopobium_other | 3.32 | Healthy | 2.93 | 6.00E−03 |
| f__Ruminococcaceae_g__Ethanoligenens_s__ | 0.61 | Healthy | 2.66 | 2.47E−02 |
| f__Gracilibacteraceae_g___s__ | 0.67 | Healthy | 2.48 | 1.76E−02 |
| f__Coriobacteriaceae_g__Collinsella_s__aerofaciens | 2.89 | Healthy | 2.44 | 1.09E−02 |
| f__Sphingomonadaceae_g__Novosphingobium_s__ | 2.99 | Healthy | 2.43 | 1.07E−02 |
| f__Rhodobacteraceae_g__Paracoccus_s__aminovorans | 2.80 | Healthy | 2.39 | 1.00E−02 |
| f__Prevotellaceae_g__Prevotella_s__stercorea | 2.60 | Healthy | 2.33 | 1.71E−03 |
| f__Desulfovibrionaceae_g__Desulfovibrio_s__ | 1.16 | Healthy | 2.24 | 2.47E−02 |
| f__Rickettsiaceae_g__Rickettsia_s__ | 1.40 | Healthy | 2.22 | 2.83E−03 |
| f__Victivallaceae_g___s__ | 1.04 | Healthy | 2.20 | 6.97E−03 |
| f__Rivulariaceae_other_other | 1.06 | Healthy | 2.19 | 2.47E−02 |
| f__Erysipelotrichaceae_g__cc_115_s__ | 0.94 | Healthy | 2.16 | 1.71E−02 |
| f__Neisseriaceae_g__Neisseria_s__subflava | 2.68 | Healthy | 2.16 | 1.83E−02 |
| f__Erysipelotrichaceae_g___Eubacterium__s__cylindroides | 2.34 | Healthy | 2.15 | 1.71E−02 |
| f__Succinivibrionaceae_g__Succinivibrio_s__ | 1.88 | Healthy | 2.06 | 5.69E−04 |
| f__Lachnospiraceae_g__Coprococcus_other | 1.55 | Healthy | 2.01 | 6.91E−08 |
| f__Staphylococcaceae_g__Staphylococcus_s__aureus | 4.16 | PSO_L | 3.72 | 7.47E−03 |
| f__Pseudomonadaceae_g__Pseudomonas_s_fragi | 3.93 | PSO_L | 3.64 | 3.35E−04 |
| f__Methylobacteriaceae_g___s__ | 3.81 | PSO_L | 3.38 | 1.68E−03 |
| f__oxalobacteraceae_g___s__ | 3.69 | PSO_L | 3.27 | 4.40E−03 |
| f__flavobacteriaceae_other_other | 1.03 | PSO_L | 2.94 | 4.15E−03 |
| f__Sphingomonadaceae_g__Sphingomonas_s__ | 3.41 | PSO_L | 2.94 | 2.08E−02 |
| o__Thiohalorhabdales_f___g___s__ | 1.40 | PSO_L | 2.89 | 4.15E−03 |
| f__Ellin517_g___s__ | 0.48 | PSO_L | 2.85 | 2.28E−02 |
| f___Marinicellaceae__g__Marinicella_s__ | 1.11 | PSO_L | 2.85 | 1.65E−02 |
| f__Propionibacteriaceae_g__Tessaracoccus_s__ | 0.78 | PSO_L | 2.79 | 2.76E−02 |
| f___g___s__ | 1.08 | PSO_L | 2.77 | 2.28E−02 |
| f__flavobacteriaceae_g__flavobacterium_s__ | 3.12 | PSO_L | 2.69 | 5.19E−05 |
| f__Micrococcaceae_other_other | 3.23 | PSO_L | 2.69 | 9.67E−03 |
| f__Williamsiaceae_g__Williamsia_s__ | 3.05 | PSO_L | 2.68 | 4.36E−02 |
| f__Microbacteriaceae_g___s__ | 3.27 | PSO_L | 2.67 | 2.24E−02 |
| f__Xanthomonadaceae_g__Wohlfahrtiimonas_s__ | 1.16 | PSO_L | 2.66 | 1.65E−02 |
| f__Cytophagaceae_g__Larkinella_s__ | 1.16 | PSO_L | 2.60 | 6.02E−03 |
| f__Pseudomonadaceae_g__Pseudomonas_s__ | 3.06 | PSO_L | 2.57 | 2.33E−03 |
| f__Rhodobacteraceae_g__Anaerospora_other | 1.16 | PSO_L | 2.52 | 5.25E−03 |
| f__Staphylococcaceae_g__Staphylococcus_s__pettenkoferi | 2.99 | PSO_L | 2.52 | 1.23E−02 |
| f__Comamonadaceae_g__Limnobacter_s__ | 1.55 | PSO_L | 2.51 | 4.31E−02 |
| f__Kineosporiaceae_g__Kineosporia_s__ | 1.26 | PSO_L | 2.49 | 3.75E−02 |
| f__Legionellaceae_g__Legionella_other | 1.60 | PSO_L | 2.46 | 1.15E−02 |
| f__Chitinophagaceae_g___s__ | 2.81 | PSO_L | 2.44 | 4.84E−04 |
| f__Acetobacteraceae_g___s__ | 3.11 | PSO_L | 2.42 | 1.75E−02 |
| f__frankiaceae_other_other | 1.46 | PSO_L | 2.42 | 1.91E−03 |
| f__Ectothiorhodospiraceae_g___s__ | 1.67 | PSO_L | 2.36 | 1.85E−02 |
| f__Dermabacteraceae_g__Dermabacter_s__ | 3.25 | PSO_L | 2.34 | 2.79E−03 |
| f__Coxiellaceae_g___s__ | 1.60 | PSO_L | 2.31 | 2.62E−02 |
| f___Tissierellaceae__g__Gallicola_s__ | 2.68 | PSO_L | 2.30 | 3.94E−02 |
| f__Aerococcaceae_g__Alloiococcus_s_otitis | 2.41 | PSO_L | 2.30 | 1.04E−05 |
| f__Hyphomicrobiaceae_g__Hyphomicrobium_s__ | 2.52 | PSO_L | 2.28 | 2.71E−02 |
| f__Dethiosulfovibrionaceae_g__Jonquetella_s__anthropi | 0.99 | PSO_L | 2.26 | 2.08E−02 |
| f__Rhodospirillaceae_g___s__ | 2.66 | PSO_L | 2.26 | 1.26E−02 |
| f__Comamonadaceae_g__Comamonas_s__ | 2.54 | PSO_L | 2.24 | 4.73E−03 |
| f__Piscirickettsiaceae_g___s__ | 1.78 | PSO_L | 2.23 | 4.39E−03 |
| f__Methylobacteriaceae_g__Methylobacterium_s__ | 2.86 | PSO_L | 2.21 | 1.00E−02 |
| f___Tissierellaceae__g__Helcococcus_s__ | 2.61 | PSO_L | 2.21 | 1.05E−03 |
| f__Comamonadaceae_g__Rhodoferax_s__ | 1.42 | PSO_L | 2.18 | 1.39E−02 |
| f__Neisseriaceae_g__Vogesella_s__ | 2.50 | PSO_L | 2.18 | 2.42E−02 |
| f__Leuconostocaceae_g__Weissella_other | 1.33 | PSO_L | 2.17 | 9.64E−03 |
| f__Alcaligenaceae_g_oligella_s__ | 2.34 | PSO_L | 2.12 | 3.31E−02 |
| f__Erythrobacteraceae_g___s__ | 2.67 | PSO_L | 2.12 | 2.31E−03 |
| f__Beijerinckiaceae_g___s__ | 2.54 | PSO_L | 2.12 | 1.62E−02 |
| f__Comamonadaceae_g__Roseateles_s__depolymerans | 0.83 | PSO_L | 2.12 | 2.08E−02 |
| f__Bacillaceae_other_other | 2.27 | PSO_L | 2.07 | 8.81E−04 |
| o__Phycisphaerales_f___g___s__ | 1.59 | PSO_L | 2.04 | 3.64E−02 |
| f__Neisseriaceae_g___s__ | 4.28 | PSO_N | 3.78 | 2.89E−02 |
| f__Neisseriaceae_g__Conchiformibius_s__ | 3.28 | PSO_N | 3.08 | 4.83E−05 |
| f__Moraxellaceae_g__Acinetobacter_other | 3.26 | PSO_N | 2.95 | 9.18E−03 |
| f__Micrococcaceae_g___s__ | 3.34 | PSO_N | 2.81 | 5.11E−03 |
| f__Bradyrhizobiaceae_other_other | 2.99 | PSO_N | 2.70 | 2.23E−02 |
| f__Staphylococcaceae_g__Staphylococcus_s__sciuri | 2.85 | PSO_N | 2.51 | 3.23E−02 |
| f__Syntrophobacteraceae_g___s__ | 1.26 | PSO_N | 2.40 | 2.85E−02 |
| f__Streptococcaceae_g__Lactococcus_s__ | 2.98 | PSO_N | 2.38 | 3.17E−02 |
| f___Chthoniobacteraceae__g___s__ | 1.26 | PSO_N | 2.35 | 2.55E−02 |
| f__Moraxellaceae_g__Moraxella_s__ | 2.55 | PSO_N | 2.29 | 1.29E−03 |
| f__Moraxellaceae_g__Perlucidibaca_s__ | 2.06 | PSO_N | 2.25 | 2.62E−02 |
| f__Actinomycetaceae_g__Trueperella_s__ | 1.01 | PSO_N | 2.22 | 3.63E−02 |
| f__Pseudonocardiaceae_g___s__ | 1.09 | PSO_N | 2.08 | 2.21E−02 |