Table 1.

Taxon Sampling, Voucher Information, and Accession Numbers

Family	Subfamily	Species	Tissue Number	Museumb	Accession Number
Noctilionidae	–	Noctilio leporinus	T4573	ISEM	KU743910*
Phyllostomidae	Carollinae	Carollia perspicillata	T5412	ISEM	NC_022422.1
Phyllostomidae	Desmodontinae	Desmodus rotundus	T3418	ISEM	NC_022423.1
Phyllostomidae	Desmodontinae	Diaemus youngi	NK13129	MSB	KU743906*
Phyllostomidae	Desmodontinae	Diphylla ecaudata	NK13627	MSB	KU743911*
Phyllostomidae	Glossophaginae	Anoura caudifer	T3681	ISEM	NC_022420.1
Phyllostomidae	Glossophaginae	Brachyphylla cavernarum	T5240	ISEM	NC_022421.1
Phyllostomidae	Glyphonycterinae	Glyphonycteris daviesi	T3711	ISEM	KU743912*
Phyllostomidae	Lonchophyllinae	Hsunycteris thomasi	T3845	ISEM	KU743907*
Phyllostomidae	Lonchorhininae	Lonchorhina aurita	MVZ185587	MVZ	KU743908*
Phyllostomidae	Macrotinae	Macrotus californicus	NK80553	MSB	KU743909*
Phyllostomidae	Micronycterinae	Micronycteris megalotis	T5539	ISEM	NC_022419.1
Phyllostomidae	Phyllostominae	Chrotopterus auritus	AMNH109773	AMNH	KU743905*
Phyllostomidae	Phyllostominae	Lophostoma silvicolum	T4497	ISEM	NC_022424.1
Phyllostomidae	Phyllostominae	Tonatia saurophila	T4488	ISEM	NC_022428.1
Phyllostomidae	Phyllostominae	Vampyrum spectrum	T3393	ISEM	NC_022429.1
Phyllostomidae	Rhynophyllinae	Rhinophylla pumilio	T4670	ISEM	NC_022426.1
Phyllostomidae	Stenodermatinae	Artibeus jamaicensis	–	–	NC_002009.1
Phyllostomidae	Stenodermatinae	Artibeus lituratus	–	–	NC_016871.1
Phyllostomidae	Stenodermatinae	Sturnira tildae	T5299	ISEM	NC_022427.1
Mormoopidae	–	Pteronotus rubiginosus	T5215	ISEM	NC_022425.1
Mystacinidae	–	Mystacina tuberculata	–	–	NC_006925.1
Rhinolophidae	–	Rhinolophus ferrumequinum korai	–	–	NC_016191.1
Rhinolophidae	–	Rhinolophus formosae	–	–	NC_011304.1
Rhinolophidae	–	Rhinolophus luctus	–	–	NC_018539.1
Rhinolophidae	–	Rhinolophus monoceros	–	–	NC_005433.1
Rhinolophidae	–	Rhinolophus pumilus	–	–	NC_005434.1
Pteropodidae	–	Pteropus dasymallus	–	–	NC_002612.1
Pteropodidae	–	Pteropus scapulatus	–	–	NC_002612.1
Pteropodidae	–	Pteropus vampyrus	–	–	Ensembl_v57_Scaffold_17814
Pteropodidae	–	Rossetus aegyptiacus	–	–	NC_007393.1
Vespertilionidae	–	Chalinolobus tuberculatus	–	–	NC_002626.1
Vespertilionidae	–	Lasiurus borealis	–	–	NC_016873.1
Vespertilionidae	–	Myotis formosus	–	–	NC_015828.1
Vespertilionidae	–	Myotis lucifugus	–	–	Ensembl_v57_Scaffold_144518
Vespertilionidae	–	Pipistrellus abramus	–	–	NC_005436.1
Vespertilionidae	–	Plecotus auritus	–	–	NC_015484.1
Vespertilionidae	–	Plecotus rafinesquii	–	–	NC_016872.1
Hipposideridae	–	Hipposideros armiger	–	–	NC_018540.1
Bovidae	–	Bos taurus	–	–	NC_006853.1
Canidae	–	Canis lupus familiaris	–	–	NC_002008.4

^aThis study.

^bUniversity of Montpellier (ISEM: Montpellier, FR), Museum of Southwestern Biology (MSB: Albuquerque, NM), Museum of Vertebrate Zoology at the University of California (MVZ: Berkeley, CA), and American Museum of Natural History (AMNH: New York, NY).