Table 1.
Bacterial strains used in this study and their genomic features.
| D. solani strain | Country, year of isolation, source | No. of scaffolds | No. of N bases | Genome size (bp) | % GC | GenBank accession (Reference) |
|---|---|---|---|---|---|---|
| IFB0099 | Poland, 2005, potato stem | 1 | 0 | 4,932,920 | 56.24 | CP024711 (this work) |
| IFB0158 | Poland, 2009, potato | 37 | 395 | 4,879,070 | 56.24 | PENA00000000 (this work) |
| IFB0221 | Germany, 2005, potato rhizosphere | 38 | 394 | 4,878,255 | 56.24 | PEMZ00000000 (this work) |
| IFB0223 | Germany, 2005, potato rhizosphere | 1 | 0 | 4,937,554 | 56.24 | CP024710 (this work) |
| NCPPB4479T IPO2222 | The Netherlands, 2007, potato | 1 | 9,200 | 4,867,258 | 56.22 | AONU01000000 (Pritchard et al., 2013) |
| GBBC 2040 | Belgium, 2007, potato | 1 | 27,548 | 4,860,047 | 56.34 | AONX01000000 (Pritchard et al., 2013) |
| MK10 | Israel, potato | 3 | 3,800 | 4,935,237 | 56.21 | AOOP01000000 (Pritchard et al., 2013) |
| MK16 | Scotland, river water | 3 | 2,100 | 4,870,382 | 56.23 | AOOQ01000000 (Pritchard et al., 2013) |
| D s0432-1 | Finland, 2004, potato stem | 4 | 0 | 4,904,518 | 56.20 | AMWE01000000 (Garlant et al., 2013) |
| RNS 08.23.3.1A Dsl 3337 | France, 2008, potato | 1 | 12,124 | 4,923,743 | 56.25 | AMYI01000000 (Khayi et al., 2014) |
| PPO 9019 | The Netherlands, 2006, grape hyacinth | 24 | 30 | 4,866,823 | 56.25 | JWLS01000000 (Khayi et al., 2015) |
| PPO 9134 | The Netherlands, 2008, hyacinth | 22 | 187 | 4,870,830 | 56.24 | JWLT01000000 (Khayi et al., 2015) |
| RNS 05.1.2A | France, 2005, potato | 37 | 0 | 4,985,571 | 56.13 | JWMJ01000000 (Khayi et al., 2015) |
| RNS 07.7.3B | France, 2007, potato | 24 | 325 | 4,871,815 | 56.24 | JWLR01000000 (Khayi et al., 2015) |