Table 3.
Distribution and density of SNP markers in the Rasmusson × PI383933 recombinant inbred line (RIL) population.
| Chromosome | Total SNPs | Unique loci† | Length (cM) | Density | Gaps (cM/locus) |
|---|---|---|---|---|---|
| (cM intervals)‡ | |||||
| 1H | 132 | 106 | 181.8 | 1.7 | 94.7–111.4, 118.7–136.6, 139.7–155.4 |
| 2H | 232 | 176 | 217.5 | 1.2 | 147.2–157.9 |
| 3H | 217 | 154 | 191.6 | 1.2 | |
| 4H | 179 | 134 | 185.6 | 1.4 | 79.9–92.8, 92.8–102.8 |
| 5H | 254 | 188 | 218.9 | 1.2 | 64.9–75.2, 175.6–185.0 |
| 6H | 187 | 134 | 147.6 | 1.1 | 11.8–22.2 |
| 7H | 193 | 149 | 185.2 | 1.2 | 118.6–127.8, 127.8–138.8 |
| Mean | 199 | 149 | 189.8 | 1.3 | |
| Total | 1394 | 1041 | 1328.3 | ||
†Number of loci that segregate independently. ‡Large regions (>9 cM) with no marker coverage.