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. 2018 Jul 11;12:393–404. doi: 10.1016/j.omtn.2018.05.022

Table 4.

Primer Pairs Used in This Study

Primer Sequence (5′–3′) GC% 3′ΔG (kcal/mol) Amplicon Size (bp) Ta (°C)
AC007182.6 F GTAAGTCAGCATGTAGCAC 47.7 −7.5 86 50
AC007182.6 R GCTCCATCAATAACATCTTCAT 36.4 −5.7
AC009948.5.007 F ATCAAGTTACAGAGCAGAG 4.1 −64 83 50
AC009948.5.007 R AACATTACCGAGGACAAC 44.4 −6.5
AL450992.2.001 F TTAGACTCTCCTTGACCAT 42.1 −6.6 113 52
AL450992.2.001 R TTCTCCTTCTGTGCTTTC 44.4 −5.7
AL928768.3 F ACAGGGAGGAAGTGTGGAG 57.9 −6.9 93 56
AL928768.3 R GTGAGTAAGGGCGGGTC 64.7 −7.4
IL21R-AS1 F CTCCGACCACTCATTCAG 55.6 −6.1 119 56
IL21R-AS1 R CTTATCACCTTGCCGTCTG 52.6 −6.6
RP11.126K1.6 F AACAGTCGCCTTCCAACAC 52.6 −6.5 118 62
RP11.126K1.6 R TCCATCACTCCTACCCATCATT 45.5 −5.7
RP11-98D18.3 F AGGCTCAGTCACCTTTCC 55.6 −6.2 81 54
RP11-98D18.3 R CCTTCTCTGTGACCGTCGA 57.9 −7.4
RP11-290L1.3 F GCGAGTGCGGCTCGTGATCTC 66.7 −5.8 168 64
RP11-290L1.3 R CCGGTCAAGCTCAAGGAACTGC 59.1 −7.5
RORC F TGCCAGAATGACCAGATTGTGCTT 45.8 −7.1 132 60
RORC R GAACAGCTCCATGCCACCGTA 57.1 −7.1
UBC F GGATTTGGGTCGCAGTTCTTG 52.4 −6.1 135 58
UBC R TGCCTTGACATTCTCGATGG 50 −6.5
YWHAZ F ACTTTTGGTACATTGTGGCTTC 40.9 −6.9 94 62
YWHAZ R CCGCCAGGACAAACCAGTA 57.9 −5.8

F and R, forward and reverse primers, respectively; 3′ΔG stands for Gibbs energy for binding of the 3′ part of the primer with the template. Ta, annealing temperature of PCR reactions.