Table 4.
Primer | Sequence (5′–3′) | GC% | 3′ΔG (kcal/mol) | Amplicon Size (bp) | Ta (°C) |
---|---|---|---|---|---|
AC007182.6 F | GTAAGTCAGCATGTAGCAC | 47.7 | −7.5 | 86 | 50 |
AC007182.6 R | GCTCCATCAATAACATCTTCAT | 36.4 | −5.7 | ||
AC009948.5.007 F | ATCAAGTTACAGAGCAGAG | 4.1 | −64 | 83 | 50 |
AC009948.5.007 R | AACATTACCGAGGACAAC | 44.4 | −6.5 | ||
AL450992.2.001 F | TTAGACTCTCCTTGACCAT | 42.1 | −6.6 | 113 | 52 |
AL450992.2.001 R | TTCTCCTTCTGTGCTTTC | 44.4 | −5.7 | ||
AL928768.3 F | ACAGGGAGGAAGTGTGGAG | 57.9 | −6.9 | 93 | 56 |
AL928768.3 R | GTGAGTAAGGGCGGGTC | 64.7 | −7.4 | ||
IL21R-AS1 F | CTCCGACCACTCATTCAG | 55.6 | −6.1 | 119 | 56 |
IL21R-AS1 R | CTTATCACCTTGCCGTCTG | 52.6 | −6.6 | ||
RP11.126K1.6 F | AACAGTCGCCTTCCAACAC | 52.6 | −6.5 | 118 | 62 |
RP11.126K1.6 R | TCCATCACTCCTACCCATCATT | 45.5 | −5.7 | ||
RP11-98D18.3 F | AGGCTCAGTCACCTTTCC | 55.6 | −6.2 | 81 | 54 |
RP11-98D18.3 R | CCTTCTCTGTGACCGTCGA | 57.9 | −7.4 | ||
RP11-290L1.3 F | GCGAGTGCGGCTCGTGATCTC | 66.7 | −5.8 | 168 | 64 |
RP11-290L1.3 R | CCGGTCAAGCTCAAGGAACTGC | 59.1 | −7.5 | ||
RORC F | TGCCAGAATGACCAGATTGTGCTT | 45.8 | −7.1 | 132 | 60 |
RORC R | GAACAGCTCCATGCCACCGTA | 57.1 | −7.1 | ||
UBC F | GGATTTGGGTCGCAGTTCTTG | 52.4 | −6.1 | 135 | 58 |
UBC R | TGCCTTGACATTCTCGATGG | 50 | −6.5 | ||
YWHAZ F | ACTTTTGGTACATTGTGGCTTC | 40.9 | −6.9 | 94 | 62 |
YWHAZ R | CCGCCAGGACAAACCAGTA | 57.9 | −5.8 |
F and R, forward and reverse primers, respectively; 3′ΔG stands for Gibbs energy for binding of the 3′ part of the primer with the template. Ta, annealing temperature of PCR reactions.