Table 2.
Selected differentially-expressed genes in the hippocampus of Np65-KO mice.
Category | NCBI accession | Full name | Fold change | P value |
---|---|---|---|---|
Cell adhesion | ||||
Fgfr4 | NM_008011 | Fibroblast growth factor receptor 4 | 2.0 | 0.004 |
Igsf1 | NM_177591 | Immunoglobulin superfamily, member 1 | 2.3 | 0.002 |
Il7r | NM_008372 | Interleukin 7 receptor | 2.1 | 0.006 |
Il1r2 | NM_010555 | Interleukin 1 receptor, type II | −2.1 | 0.002 |
Ptprd | XR_107615 | Protein tyrosine phosphatase, receptor type D | −2.3 | 0.015 |
Cdh1 | NM_009864 | Cadherin 1 | −2.4 | 0.010 |
Cdh4 | NM_009867 | Cadherin 4 | −2.1 | 0.004 |
Cdh6 | NM_007666 | Cadherin 6 | −2.2 | 0.043 |
Pcdh7 | NM_001122758 | Protocadherin 7 | −5.8 | 0.020 |
Pcdh12 | NM_017378 | Protocadherin 12 | −2.3 | 0.045 |
Pcdh17 | NM_001013753 | Protocadherin 17 | −2.2 | 0.000 |
Itga1 | NM_001033228 | Integrin alpha 1 | 3.0 | 0.047 |
Itga9 | NM_133721 | Integrin alpha 9 | 10.4 | 0.000 |
Development | ||||
Ccr5 | NM_009917 | Chemokine (C-C motif) receptor 5 | −2.1 | 0.009 |
Foxo3 | AK143198 | Forkhead box O3 | −2.0 | 0.004 |
Mbp | NM_010777 | Myelin basic protein | −2.2 | 0.014 |
Mef2c | NM_025282 | Myocyte enhancer factor 2C | −2.1 | 0.034 |
Wif1 | NM_011915 | Wnt inhibitory factor 1 | −2.1 | 0.001 |
Ntf3 | NM_001164034 | Neurotrophin 3 | 3.2 | 0.044 |
Gcm1 | NM_008103 | Glial cells missing homolog 1 | 2.9 | 0.019 |
Trp73 | NM_011642 | Transformation related protein 73 | 2.3 | 0.040 |
Aldh1a3 | NM_053080 | Aldehyde dehydrogenase family 1, subfamily A3 | −2.1 | 0.008 |
Rpgrip1 | NM_023879 | Retinitis pigmentosa GTPase regulator interacting protein 1 | −2.5 | 0.020 |
Crb1 | NM_133239 | Crumbs homolog 1 | −2.5 | 0.039 |
Vsx1 | NM_054068 | Visual system homeobox 1 homolog | −3.4 | 0.015 |
Krt12 | NM_010661 | Keratin 12 | −2.9 | 0.000 |
Sfrp5 | NM_018780 | Secreted frizzled-related sequence protein 5 | −2.0 | 0.006 |
Myo7a | NM_008663 | Myosin VIIA | −2.8 | 0.040 |
Cthrc1 | NM_026778 | Collagen triple helix repeat containing 1 | −2.1 | 0.000 |
Neurotransmission and ion channel | ||||
Cabp5 | NM_013877 | Ca2+ binding protein 5 | 3.5 | 0.031 |
Calb1 | AK038856 | Calbindin 1 | 2.1 | 0.004 |
Calml4 | NM_138304 | Calmodulin-like 4 | 3.0 | 0.007 |
Cplx2 | NM_009946 | Complexin 2 | 2.1 | 0.033 |
Htr4 | NM_008313 | 5-hydroxytryptamine (serotonin) receptor 4 | 2.4 | 0.043 |
Htr3a | NM_013561 | 5-hydroxytryptamine (serotonin) receptor 3A | −2.5 | 0.001 |
Clca5 | NM_178697 | Cl– channel Ca2+ activated 5 | 2.9 | 0.000 |
Kcnj9 | NM_008429 | K+ inwardly-rectifying channel, subfamily J, member 9 | 4.2 | 0.000 |
Signal transduction | ||||
Map2k7 | NM_001042557 | Mitogen-activated protein kinase kinase 7 | −2.67 | 0.000 |
Pla2g4e | NM_177845 | Phospholipase A2, group IVE | 4.64 | 0.000 |
Stk38l | NM_172734 | Serine/threonine kinase 38 like | 4.80 | 0.013 |
Ppp6r1 | NM_172894 | Protein phosphatase 6, regulatory subunit 1 | 2.95 | 0.033 |
Xaf1 | NM_001037713 | XIAP associated factor 1 | 5.99 | 0.000 |
Lactb | NM_030717 | Lactamase, beta | 24.30 | 0.000 |