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. 2018 Sep 8;34(17):i884–i890. doi: 10.1093/bioinformatics/bty560

Table 3.

UMI preprocessing time comparison of fastp, umis and UMI-tools

Tools Time (min) Throughput (read/s)
fastp 4.6 104302.9
umis 12.43 38599.6
UMI-tools 28.38 16906.4