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. 2018 Sep 8;34(17):i748–i756. doi: 10.1093/bioinformatics/bty597

Table 4.

Effectiveness of the filtering algorithm in Mashmap2

Id Count of output mappings
Recall scores
Without filter With filter Ratio (without/with) Without filter (%) With filter (%)
D1 145 82 1.77 100.0 100.0
D2 6, 541, 930 3985 1642 99.9 97.5
D3 53, 331, 538 3137 17 001 99.7 97.1
D4 152, 536, 106 4756 32 072 100.0 97.0
D5 152, 266, 777 13 834 11 007 100.0 97.5
D6 18, 604, 261 12 930 1439 99.9 99.3

Note: A large fraction of mappings were filtered out by the algorithm, while the recall scores remained largely unaffected. Last column in this table is copied from Table 3 for convenience.