Table 4.
Summary of SNPs associated with drought tolerance traits.
| Traits | SNP IDs | Chr. | Pos. (Mb) | QTN effect | LOD score | r2 (%) | Number of candidate genes |
|---|---|---|---|---|---|---|---|
| RRDM | TM36896 | A10 | 100.64 | -0.6333 | 3.41 | 14.57 | 59 |
| TM82142 | D13 | 58.86 | -0.5046 | 3.71 | 4.82 | 103 | |
| TM50155 | D01 | 59.85 | -0.3164 | 4.47 | 3.27 | 91 | |
| RHL | TM37191 | A11 | 6.02 | 0.0631 | 4.86 | 14.14 | 84 |
| TM9833 | A04 | 60.55 | 0.0246 | 6.21 | 8.60 | 83 | |
| TM55926 | D04 | 10.80 | 0.0192 | 4.23 | 4.30 | 44 | |
| TM30039 | A09 | 2.63 | 0.0244 | 3.40 | 2.76 | 51 | |
| TM72632 | D09 | 44.33 | -0.0398 | 4.21 | 16.88 | 81 | |
| TM62940 | D06 | 60.15 | -0.0253 | 3.71 | 4.26 | 55 | |
| RPC | TM66782 | D07 | 54.23 | -19.9393 | 4.34 | 6.35 | 67 |
| TM38632 | A11 | 59.82 | -17.9695 | 3.47 | 5.16 | 3 | |
| RSS | TM77502 | D12 | 3.61 | -1.1742 | 3.89 | 19.60 | 69 |
| TM75380 | D11 | 4.17 | 1.2065 | 3.67 | 21.01 | 93 | |
| RSDM | TM7846 | A03 | 90.78 | 1.0222 | 3.56 | 5.03 | 33 |
| TM10434 | A05 | 8.42 | 1.217 | 4.92 | 6.28 | 130 | |
| TM13658 | A06 | 1.84 | 0.597 | 4.73 | 2.59 | 76 | |
| TM59389 | D06 | 8.06 | -1.1709 | 3.26 | 15.95 | 49 | |
| RPH | TM11090 | A05 | 23.64 | -0.0826 | 4.53 | 5.54 | 48 |
| TM29675 | A08 | 96.79 | -0.0545 | 3.26 | 2.11 | 63 | |
| TM77685 | D12 | 6.01 | 0.0905 | 3.27 | 18.43 | 44 |
Chr, chromosome; Pos, position; QTN, quantitative trait nucleotide. RRDM, relative root dry matter; RHL, relative hypocotyl length; RPC, relative proline content; RSS, relative soluble sugar content; RSDM, relative shoot dry matter; RPH, relative plant height.