Table 1.
Gene | Gene function | Genetic variant | Associations | References |
---|---|---|---|---|
TNFR1B | TNF receptor superfamily 1B; binds tumor necrosis factor involved in apoptosis and inflammation, proliferation, survival, and differentiation | rs1061622 | Positive response to etanercept, poor response to infliximab and adalimumab in Ps | Vasilopoulos 2012 [25] |
TNFAIP3 | TNF-α induced protein 3 gene; expression rapidly induced by TNF, inhibits NF-κB activation, TNF-mediated apoptosis, critical for limiting inflammation by terminating TNF-induced NF-κB responses | rs2230926 | Positive response to anti-TNF in Ps | Tejasvi 2012 [26] |
rs610604 | No association with response to ustekinumab in Ps | Talamonti 2013 [30] | ||
IL-12B | Ligand IL23R Differentiation of Th1 cells; stimulation of INF-γ and TNF-α production; expansion and maintenance of Th17 cells |
rs3212227 | Ps Early onset of Ps PsA PsA, Ps |
Cargil 2007 [15], Capon 2007 [14], Indhumanthi 2016 [16], Nair 2008 [31] Smith 2008 [32] Filer 2008 [33] Liu 2008 [34], Li 2009 [35] |
rs6887695 | Ps PsA PsA, Ps |
Cargil 2007 [15], Capon 2007 [14], Smith 2008 [32], Nair 2008 [31], Filer 2008 [33], Liu 2008 [34] Li 2009 [35] |
||
IL-13 | Genetic variations may result in deregulation of the Th1 and Th17 pathways, involved in B-cell differentiation | rs20541 | Ps PsA ↑ PsA in Ps PsA |
Chang 2008 [36] Duffin 2009 [37]; Eder 2011 [38] Bowes 2011 [39] |
rs848 | PsA ↑ PsA in Ps PsA |
Duffin 2009 [37] Eder 2011 [38] Bowes 2011 [39] |
||
rs1800925 | Ps, RA ↑ PsA in Ps PsA |
Li 2009 [35] Eder 2011 [38] Bowes 2011 [39] |
||
IL-23R | Receptor of IL-23, hyperproliferation of psoriatic skin, expansion and maintenance of Th17 cells, promoter of chronic inflammation in RA, IL-23 inhibits the development of Treg cells, necessary for differentiation of Th17 | rs7530511 | Early onset of Ps Ps PsA RA, PsA |
Smith 2008 [32] Nair 2008 [31] Filer 2008 [33] Li 2009 [35] |
rs11209026 | Early onset of Ps Ps PsA |
Smith 2008 [32] Nair 2008 [31]; Filer 2008 [33] |
||
rs2201841 | Ps RA |
Indhumanthi 2016 [16] Farago 2008 [40] |
||
IL-1B | Mediator of the inflammatory response, inhibits Treg cells, necessary for differentiation of Th17 | rs16944 | Ps, PsA RA |
Reich 2002 [41] Tolusso 2006 [42] |
rs1143634 | Ps, PsA RA |
Reich 2002 [41] Tolusso 2006 [42] |
||
IL-10 | Inhibits Th1 differentiation, promoting Treg differentiation | rs1800896 | Ps RA Response to anti-TNF in RA |
Baran 2008 [43] Lee 2012 [44] Liu 2008 [45] |
rs1800871 | Ps | Baran 2008 [43] | ||
rs1800872 | Ps RA |
Baran 2008 [43] Lee 2012 [44] |
||
IL-21 | Increased hyperproliferation of psoriatic skin, increased mononuclear inflammation | rs6822844 | RA Ps, PsA |
Zhernakova 2007 [46] Schrodi 2008 [47] |
TNF | Mediates numerous inflammatory and immunoregulatory activities | rs1800629 (–308G>A) |
Genotype AA – poor response to etanercept in RA Genotype AG – a reduced risk of Ps |
Maxwell 2008 [28] Li 2007 [17] |
rs361525 (–238G>A) |
Genotype GA – poor response to infliximab in RA and an increased risk of Ps | Maxwell 2008 [28] Li 2007 [17] |
||
rs1799724 | Positive response to etanercept, poor response to infliximab and adalimumab in Ps | Vasilopoulos 2012 [25] | ||
HLA-C | Belongs to the MHC class I receptors, expressed in nearly all cells, and present small peptides to the immune system, HLA-C is a locus on chromosome 6, which encodes for a large number of HLA-C alleles that are class-I MHC receptors | rs10484554 | Positive response to adalimumab in Ps, poor response to ustekinumab in Ps | Masouri 2016 [29] |
IL-17R | IL-17 receptor binds interleukin 17A, protects against extracellular pathogens, but conversely promotes inflammatory pathology in autoimmune diseases | rs4819554 | Positive response to anti-TNF in Ps | Batalla 2018 [24] |
ERAP1 | Endoplasmic reticulum aminopeptidase 1, encoded protein is an aminopeptidase involved in trimming HLA class I-binding precursors so that they can be presented on MHC class I molecules | rs151823 | Positive response to ustekinumab in Ps | Masouri 2016 [29] |
rs26653 | Positive response to ustekinumab in Ps | Masouri 2016 [29] |