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. 2018 Sep 1;10(1):e2018056. doi: 10.4084/MJHID.2018.056

Table 3.

Summary of prediction values for eight novel missense mutations identified in F8 gene. Prediction of the novel missense mutation effect was performed on factor VIII protein and biological function using multiple software. SIFT score ≤ 0.05 indicates the damaging/deleterious effect and SIFT score above than 0.05 indicates a tolerated effect. A PolyPhen2 score ranges from 0.0 (tolerated) to 1.0 (deleterious), while for PROVEAN score that is equal to or less than a predefined threshold of −2.5, the variant is predicted to have a “deleterious” effect.

Patients Nucleotide Changes Amino Acid Changes Disease Severity SIFT Score PolyPhen2 Score PROVEAN Score Missense Prediction
HA18 c.1354 G > T D452Y Mild <0.05 1.00 −7.71 Damaging
HA25 c.1016 T > G M339R Severe <0.05 1.00 −5.35 Damaging
HA67 c.6986 C > G P2329R Severe <0.05 1.00 −7.85 Damaging
HA70 c.6085 A > T M2029L Mild 0.05 0.106 −2.47 Neutral/Benign
HA76 c.2159 G > T G720V Severe <0.05 1.00 −7.26 Damaging
HA77 c.5609 T > C L1870P Moderate <0.05 1.00 −6.32 Damaging
HA80 c.6272 A > C K2091T Mild 0.01 1.00 −2.92 Damaging
HA86 c.6857 A > T D2286V Severe <0.05 0.999 −6.23 Damaging

HA, Haemophilia A.