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. 2018 Sep 10;8:13497. doi: 10.1038/s41598-018-31812-9

Figure 6.

Figure 6

Overview of MD simulations. (A) Cα root mean square displacements (RMSDs) of replicate #1 simulations. (B) Cα root mean square fluctuations (RMSFs) of replicate #1 simulations. (C) Dynamics of His453 flipping between ‘in’ and ‘out’ conformations. Shown are the trajectories of the His453 psi dihedral angle, which reflects how the residue flips between its ‘in’ (~−28°) and ‘out’ (~143°) conformation.