Table 4.
Expression profile of cell wall synthesis and degradation related genes in response to RBSDV infection.
| Gene ID | Annotation | log2(TL/CL) | Expression trend |
|---|---|---|---|
| Cellulose synthase | |||
| GRMZM2G111642 | cellulose synthase5 | 0.918326826 | up |
| GRMZM2G018241 | cellulose synthase-9 | 0.964970747 | up |
| GRMZM2G424832 | cellulose synthase-4 | 0.728567596 | up |
| GRMZM2G378836 | cellulose synthase A catalytic subunit 6 | 2.180462068 | up |
| GRMZM2G112336 | cellulose synthase A catalytic subunit 10 | 1.787277899 | up |
| GRMZM2G122431 | cellulose synthase-like protein | 0.785875406 | up |
| GRMZM2G027723 | cellulose synthase A catalytic subunit 2 | 1.04980425 | up |
| GRMZM2G028353 | cellulose synthase-7 | 1.166988119 | up |
| GRMZM2G025231 | cellulose synthase7 | 1.535744163 | up |
| GRMZM2G339645 | cellulose synthase-like | −0.706432842 | down |
| GRMZM2G142898 | cellulose synthase A catalytic subunit 7 | −1.05281387 | down |
| GRMZM5G876395 | cellulose synthase A catalytic subunit 3 | −0.971682697 | down |
| GRMZM2G014558 | cellulose synthase-like protein E6 | −0.739728946 | down |
| Glucanase | |||
| GRMZM2G125991 | endoglucanase 7 | 1.288855833 | up |
| GRMZM2G154678 | endoglucanase 16 | 2.481411225 | up |
| GRMZM2G482256 | endoglucanase 5 | 0.73974828 | up |
| GRMZM2G147849 | endo-1,4-beta-glucanase Cel1 | 0.677179814 | up |
| GRMZM2G147849 | endo-1,4-beta-glucanase | 0.677179814 | up |
| GRMZM2G076348 | endo-1,3;1,4-beta-D-glucanase | −0.741829982 | down |
| GRMZM2G331566 | endoglucanase | −1.836085972 | down |
| Glycoside transferase | |||
| GRMZM2G178025 | glycoside transferase | 1.034966325 | up |
| AC199765.4_FG008 | glycoside transferase | 0.971121742 | up |
| Glycosyltransferase | |||
| GRMZM2G028286 | xyloglucan glycosyltransferase 10 | 1.213435877 | up |
| Pectin related | |||
| GRMZM2G131912 | pectate lyase 8 | −0.684198742 | down |
| GRMZM2G043415 | pectinesterase | −1.700156416 | down |
| GRMZM2G019411 | pectinesterase-1 | −0.593443161 | down |
| GRMZM2G455564 | pectinesterase 8 | −0.755441006 | down |
| GRMZM2G012328 | pectinesterase inhibitor | −1.107158277 | down |
| Glucosidase | |||
| GRMZM2G031628 | Beta-glucosidase 18 | 4.935523594 | up |
| GRMZM2G148176 | Beta-glucosidase 8 | 1.810324677 | up |
| AC234160.1_FG003 | Beta-glucosidase 1 | 1.014596947 | up |
| Galacturonase | |||
| GRMZM2G026855 | polygalacturonase | 0.796011447 | up |
| GRMZM2G333980 | polygalacturonase inhibitor 1 | 0.952508693 | up |
| GRMZM2G004435 | polygalacturonase | 1.153591577 | up |
| GRMZM2G121312 | polygalacturonase inhibitor 2 | 1.257111081 | up |
| GRMZM2G052844 | polygalacturonas | 2.586290183 | up |
| GRMZM2G467435 | polygalacturonas | 0.933885674 | up |
| GRMZM2G002034 | polygalacturonas | 0.785210875 | up |
| GRMZM2G038281 | Beta-galactosidase 3 | 2.386748111 | up |
| GRMZM2G178106 | Beta-galactosidase 5 | 1.966547727 | up |
| GRMZM2G417455 | Beta-galactosidase 3 | −1.253589062 | down |
| GRMZM2G127123 | Beta-galactosidase 4 | −0.841155087 | down |
| GRMZM2G170388 | polygalacturonase precursor | −0.726971784 | down |
| GRMZM2G167786 | polygalacturonase inhibitor 1 | −1.296047742 | down |
| GRMZM2G030265 | exopolygalacturonase | −1.09989177 | down |
| GRMZM2G174708 | polygalacturonase inhibitor 1 precursor | −2.018772527 | down |
| Other genes related cell wall structure | |||
| GRMZM2G103972 | putative mixed-linked glucan synthase 1 | −1.363662044 | down |
| GRMZM2G109959 | glycine-rich cell wall structural protein | 2.392335992 | up |