Table 3.
Kyoto encyclopedia of genes and genomes (KEGG) pathway enrichment of significantly up/down-regulated DEGs in R2B1/R4B1
| Pathway | DEGs with pathway annotation (543) | P-value | |
|---|---|---|---|
| Plant hormone signal transduction | 49 | 0.000917 | Up-regulated DEGs in R2B1 |
| Protein processing in endoplasmic reticulum | 40 | 0.000665 | |
| RNA transport | 33 | 0.012593 | |
| Spliceosome | 31 | 0.078185 | |
| Endocytosis | 25 | 0.010854 | |
| Pyrimidine metabolism | 24 | 0.029783 | |
| RNA degradation | 22 | 0.001054 | |
| Ubiquitin mediated proteolysis | 21 | 0.0133 | |
| Starch and sucrose metabolism | 6 | 0.024124 | |
| Alanine, aspartate and glutamate metabolism | 4 | 0.002149 | Up-regulated DEGs in R4B1 |
| Diterpenoid biosynthesis | 3 | 0.005284 | |
| Insulin resistance | 3 | 0.010482 | |
| Biosynthesis of amino acids | 34 | 0.000934 | Down-regulated DEGs in R2B1 |
| Protein processing in endoplasmic reticulum | 29 | 0.002805 | |
| RNA transport | 29 | 0.000742 | |
| Spliceosome | 28 | 0.004517 | |
| Purine metabolism | 25 | 0.00642 | |
| Aminoacyl-tRNA biosynthesis | 23 | 0 | |
| Pyrimidine metabolism | 22 | 0.001743 | |
| RNA polymerase | 10 | 0.034698 | |
| Plant hormone signal transduction | 16 | 0.955624 | |
| Ribosome | 16 | 0 | Down-regulated DEGs in R4B1 |
| Porphyrin and chlorophyll metabolism | 5 | 0.000222 | |
| Photosynthesis | 4 | 0.002138 |