Table 3.
Top 50 most significantly upregulated transcripts in S. mekongi male worms
| Transcript ID | Protein description | Log2(FC) | P-value | FDR | Pfam annotation |
|---|---|---|---|---|---|
| comp65_seq18 | Reverse transcriptase | 16.2 | 2.66E-92 | 1.24E-88 | – |
| comp2831_seq1 | Uncharacterized protein | 15.2 | 1.47E-70 | 2.29E-67 | – |
| comp1481_seq2 | Clone ZZD1216 mRNA sequence | 14.8 | 1.19E-70 | 2.01E-67 | – |
| comp926_seq0 | Uncharacterized protein | 14.2 | 3.84E-56 | 3.01E-53 | – |
| comp2062_seq0 | Uncharacterized protein | 13.8 | 1.53E-45 | 6.63E-43 | – |
| comp4508_seq0 | Integrin | 13.7 | 2.79E-47 | 1.30E-44 | – |
| comp4099_seq6 | Uncharacterized protein | 13.6 | 3.96E-41 | 1.34E-38 | G-patch domain, FtsJ-like methyltransferase |
| comp556_seq2 | Hypothetical protein | 13.6 | 3.35E-32 | 4.84E-30 | – |
| comp4395_seq2 | Putative poly(Rc) binding protein | 13.6 | 1.45E-43 | 5.73E-41 | KH domain |
| comp298_seq2 | Uncharacterized protein | 13.5 | 2.02E-41 | 7.11E-39 | Ankyrin repeats |
| comp5387_seq1 | Serine/threonine kinase | 13.2 | 1.95E-36 | 4.39E-34 | Protein kinase domain, protein tyrosine kinase |
| comp3544_seq2 | Dynein-associated protein | 13.2 | 1.51E-34 | 2.79E-32 | – |
| comp510_seq4 | Tropomyosin-2 | 13.0 | 1.04E-22 | 6.12E-21 | Aida N-terminus, tropomyosin |
| comp1917_seq1 | Lysine-tRNA ligase | 12.8 | 2.43E-26 | 2.02E-24 | tRNA anti-codon, OB-fold nucleic acid binding domain |
| comp7221_seq1 | Uncharacterized protein | 12.6 | 3.04E-27 | 2.75E-25 | – |
| comp8398_seq0 | Putative homeobox protein | 12.6 | 6.23E-25 | 4.54E-23 | N-terminal of Homeobox Meis and PKNOX1 |
| comp3445_seq0 | Receptor protein-tyrosine kinase | 12.6 | 1.84E-26 | 1.55E-24 | Receptor L domain, furin-like cysteine rich region |
| comp3797_seq0 | Uncharacterized protein | 12.5 | 2.10E-26 | 1.75E-24 | BTG family |
| comp3182_seq1 | Putative multiple ankyrin repeats single KH domain protein | 12.4 | 2.95E-17 | 9.84E-16 | Ankyrin repeats |
| comp115_seq0 | Uncharacterized protein | 12.4 | 1.44E-22 | 8.37E-21 | Arrestin (or S-antigen), N-terminal domain |
| comp7837_seq2 | Uncharacterized protein | 12.2 | 8.70E-24 | 5.69E-22 | Cadherin domain |
| comp5447_seq1 | Myosin light chain kinase, smooth muscle | 12.2 | 1.17E-15 | 3.10E-14 | Immunoglobulin I-set domain |
| comp3754_seq1 | Metastasis suppressor protein 1 | 12.1 | 3.29E-19 | 1.38E-17 | IRSp53/MIM homology domain |
| comp8738_seq10 | Uncharacterized protein | 12.1 | 2.30E-21 | 1.20E-19 | – |
| comp4029_seq0 | Plexin-A1 | 12.1 | 4.14E-20 | 1.88E-18 | Plexin repeat, IPT/TIG domain |
| comp138_seq8 | SJCHGC08958 protein | 12.0 | 1.54E-13 | 3.00E-12 | Trematode eggshell synthesis protein |
| comp5826_seq0 | Uncharacterized protein | 12.0 | 2.10E-22 | 1.19E-20 | Leucine rich repeat |
| comp3044_seq3 | Uncharacterized protein | 12.0 | 1.01E-20 | 4.89E-19 | NIF3 (NGG1p interacting factor 3) |
| comp8147_seq2 | Uncharacterized protein | 11.9 | 4.28E-20 | 1.94E-18 | Laminin G domain |
| comp595_seq0 | Choline dehydrogenase, mitochondrial | 11.9 | 7.87E-15 | 1.85E-13 | GMC oxidoreductase |
| comp1402_seq1 | Uncharacterized protein | 11.9 | 1.25E-16 | 3.78E-15 | – |
| comp490_seq3 | Serine/threonine-protein kinase PAK 3 | 11.9 | 5.01E-19 | 2.07E-17 | P21-Rho-binding domain |
| comp8255_seq1 | Uncharacterized protein | 11.8 | 3.00E-20 | 1.38E-18 | – |
| comp4371_seq0 | Putative ABC transporter | 11.8 | 1.63E-19 | 7.01E-18 | ABC transporter |
| comp5811_seq8 | Rapamycin-insensitive companion of mTOR | 11.8 | 2.32E-17 | 7.85E-16 | Rapamycin-insensitive companion of mTOR, domain 5 |
| comp9143_seq1 | Regulator of G-protein signaling 3 | 11.8 | 5.29E-21 | 2.64E-19 | C2 domain, PDZ domain (DHR or GLGF) |
| comp9843_seq1 | Uncharacterized protein | 11.8 | 6.13E-20 | 2.71E-18 | Rhodopsin family |
| comp8166_seq1 | Uncharacterized protein | 11.8 | 4.38E-21 | 2.20E-19 | – |
| comp1561_seq0 | Uncharacterized protein | 11.6 | 2.16E-12 | 3.55E-11 | – |
| comp6197_seq1 | Uncharacterized protein | 11.6 | 3.52E-17 | 1.17E-15 | – |
| comp9531_seq0 | Putative ankyrin 2,3/unc44 | 11.6 | 2.07E-16 | 6.05E-15 | Ankyrin repeats |
| comp9039_seq1 | Centrosomal protein of 120 kDa | 11.6 | 2.64E-19 | 1.11E-17 | C2 domain, Cep120 protein |
| comp2906_seq3 | CD97 antigen | 11.6 | 3.96E-18 | 1.47E-16 | Secretin family |
| comp3517_seq2 | Rho guanine nucleotide exchange factor 12 | 11.6 | 1.38E-19 | 6.00E-18 | Regulator of G protein signalling-like domain |
| comp2195_seq3 | Uncharacterized protein | 11.6 | 1.91E-15 | 4.93E-14 | Galactoside-binding lectin |
| comp5487_seq0 | Uncharacterized protein C7orf63-like protein | 11.6 | 8.05E-20 | 3.52E-18 | – |
| comp4205_seq4 | Serine-rich adhesin for platelets | 11.5 | 2.14E-14 | 4.76E-13 | – |
| comp3759_seq1 | Putative Alstrom syndrome protein | 11.5 | 1.86E-16 | 5.50E-15 | – |
| comp9022_seq1 | Uncharacterized protein | 11.5 | 1.97E-18 | 7.61E-17 | MORN repeat |
| comp10754_seq0 | Uncharacterized protein | 11.4 | 8.21E-19 | 3.31E-17 | Cadherin-like |