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. Author manuscript; available in PMC: 2018 Sep 12.
Published in final edited form as: J Stat Softw. 2017 Jul 17;79(4):1–26. doi: 10.18637/jss.v079.i04

Table 5:

List of functions in the package – Part II. Models are described in Table 2. Parameters are defined in Table 1. Jarnac and SBML are external languages for systems biology models.

Function Description
monte_carlo Runs a Monte Carlo simulation of a given model.
parameterize_1comp Parameterizes the model 1compartment.
parameterize_3comp Parameterizes the model 3compartment.
parameterize_pbtk Parameterizes the model pbtk.
parameterize_schmitt Parameterizes predict_partitioning_schmitt.
parameterize_steadystate Parameterizes the model 3compartmentss, used in Wetmore et al. (2012) and Wetmore (2015).
predict_partitioning_schmitt Predicts partition coefficients using Schmitt’s method (Schmitt 2008b).
solve_1comp Solves the model 1compartment.
solve_3comp Solves the model 3compartment.
solve_pbtk Solves the model pbtk.
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