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. 2018 Sep 7;9:989. doi: 10.3389/fphys.2018.00989

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Copyright © 2018 Bernabeu, Lu, Abu-Qamar, Aiello and Sun.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Segmentation of a partially clotted MA, (a) delineation of the MA body and feeding/draining capillaries against AOSLO movie frame, (b) same delineation against perfusion map, (c) MA body (red) and MA feeding/draining capillaries (black) were independently segmented, (d) using AOSLO video files for reference, the perfused (blue) vs. clotted regions (green) within the MA body were also segmented.